Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03639 ATGGCCAATAACAACCCTTCCGACGCTCCCGCCGCCGATGACTTCCTCGAACAAATCCTCAGTCTTCAGACCTTCGCCTCCTCCGATTCTGGATTAACCGGACCCGACGTCGGCCTTACTGGAACTTCTCCGATGATGCTTCAGCTTAACTCCTCCGACGCTAACCATCACCTCGCCGCCGGAGGTTCCTTTCATGCGCCGGTTTATCACCAGTTAGGTTTGAGCTTGGACCAAGGTAAAGGAGGATTCTTGAAACCTGAGGAAGCTTCTGGTAGTGGTGAACGCTTTCGTAACGACGTCGTTCATGGTAGACCTAATAATGTTTTTCATGGGCAACCCATGCATACTAATGTTCCTGCTGCTCCACATCCTCCAGCCATGCGTCCTAGGGTGCGGGCTAGAAGAGGACAGGCTACAGATCCACACAGCATAGCTGAGAGATTACGCAGAGAAAGAATAGCAGAAAGGATCAGGGCACTGCAAGATTTGGTTCCAAGTGTCAACAAGACAGATAGAGCTGCCATGTTAGATGAAATTGTGGATTACGTCAAGTTCTTAAGGCTTCAAGTAAAGGTTTTGAGCATGAGTCGATTGGGCGGAGCAGGTGCAGTGGCACCACTGGTAACTGACATCCCATTATCATCAGTCGAGGAAGAAGGCAGTGAAGGTGGAAGAAACCGACCGGTTTGGGACAAGTGGTCGAATGATGGCACAGAAAAACAGGTAGCTAAGCTTATGGAAGAAAATGTTGGAGCTGCCATGCAACTGCTTCAATCAAAGGCGCTTTGCATCATGCCAATCTCCCTGGCGTCAGCGATATACCAGTCGCAGCCACCAGACAGCTCTAGTATAGTCAAGCCTGAAACCAATCCTCCCTCATAG 882 0.5 MANNNPSDAPAADDFLEQILSLQTFASSDSGLTGPDVGLTGTSPMMLQLNSSDANHHLAAGGSFHAPVYHQLGLSLDQGKGGFLKPEEASGSGERFRNDVVHGRPNNVFHGQPMHTNVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQDLVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGGRNRPVWDKWSNDGTEKQVAKLMEENVGAAMQLLQSKALCIMPISLASAIYQSQPPDSSSIVKPETNPPS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03639 293 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 135 196 IPR036638 GO:0046983
Tsu07g03639 293 MobiDBLite consensus disorder prediction 114 141 - -
Tsu07g03639 293 SMART finulus 143 192 IPR011598 GO:0046983
Tsu07g03639 293 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 8 282 - -
Tsu07g03639 293 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 137 186 IPR011598 GO:0046983
Tsu07g03639 293 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 8 282 - -
Tsu07g03639 293 Gene3D - 132 194 IPR036638 GO:0046983
Tsu07g03639 293 Pfam Helix-loop-helix DNA-binding domain 142 186 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03639 Tsu-Chr7 42608324 42612604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03639 64 292 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 78.390 2.21e-115 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tsu07g03639 HLH 1.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03639 - - gmx:100797789 453.751