Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03636 ATGGAATCGCACGGCGGAGGACCACTTCGTTCACGGAGTTCACAATCCGCTTCACCTTCTCACTCCGCCTCTGCCTCCGCCACCTCTTCCATCCACAAACGCAAGCTCGTTTCTGAAGATCACGCGCCTCCATTTCCTCCTTCTTCCTTATCCGCCGATACTCGCGACGGCGCACTCACCTCCAACGACGACCTCGAAAGCATCTCCGCTCGCGGCAATGACTCTGATTCCGACGATGATTCTGAAGATGCTGTCGTTGATGACGACGAAGATGAGTACGACAATGACAACGGTTCCTCGATGAGAAACTTCACTGCTTCTAGGCTCAATAACGCTCCTTCTGCTCCTCGTAACAGTAAGCTCAAAACTGAAAACTCTACTGTTAAGATTGAACAATCTGATGTTGCGAAAGATGCTGGACCTACCGTTACCGGTGCTGCTGCTGGTGGCGGTTCTGTTCCCGGCATTGTAGTTAAGGAGGATGCAACGAAGATATTCACTGAAAATTTGCAGACTAGTGGTGCTTATAGTGCTAGGGAAGAGAGTCTCAAGAAAGAGGAAGAAACTGGAAAGCTGAAATTTGCATGCCTTTCGAATGATGGTGTTGACGAGCATATGGTTTGGTTGATAGGATTGAAGAATATATTTGCTAGACAACTTCCCAATATGCCCAAGGAGTATATTGTTCGACTTGTTATGGATAGGAGCCATAAGTCTGTAATGGTTATAAGGCGTAATCATGTTGTTGGAGGCATTACATATCGCCCATATGCAAGCCAGAGGTTCGGTGAGATAGCCTTTTGTGCAATTACGGCTGATGAGCAAGTAAAAGGATATGGTACCAGATTGATGAATCACCTAAAACAGTATGCTCGTGATGTAGATGGGCTGACCCATTTTCTCACATATGCTGACAATAATGCTGTTGGCTATTTTATCAAACAGGGATTTACTAAAGAGATTCATTTGGAGAAAGATCGATGGCAAGGTTACATAAAGGATTATGATGGGGGAATTCTCATGGAATGTAAGATTGATCCAAAGCTTCCTTACACTGATTTATCAACTATGATCCGTCGTCAAAGACAGGCAATAGATGAAAAGATTAGAGAACTGTCAAACTGTCACATTGTTTATACTGGAATTGATTTTCATAAGAGAGAAGCTGGTGTTCCTAAGAAAATTATTGATGACATCCCTGGTTTGAGAGAGGCTGGATGGACTCTTGATCAGTGGGGTCATTCGCGGTTCAGAACTTTAGGTGGTTCTACTGACAATGCTACAAACCTGAAACATTTAACCATGCTTATGCGTCAACTTCTAAAGTCAATGCTCGATCACGCTGATGCTTGGCCATTCAAGGAACCTGTTGATGCACGGGATGTTCCTGATTATTATGAAATCATCAAAGATCCAATGGATCTGAAGACAATGAGTAAGAGGGTGGAATCAGAACAATATTATGTCACATTTGAGATGTTTGTAGAGGATGTCAAAAGAATGTTTTCGAATGCACGTACCTATAATTCTCCAGAAACCATATATTACAAATGTGCTACAAGACTAGAAGCCCACTTTCAAAGCAAAGTGACATCATTCCTTCAGTCTGGCGCTAAAGTTCAGTAA 1626 0.4317 MESHGGGPLRSRSSQSASPSHSASASATSSIHKRKLVSEDHAPPFPPSSLSADTRDGALTSNDDLESISARGNDSDSDDDSEDAVVDDDEDEYDNDNGSSMRNFTASRLNNAPSAPRNSKLKTENSTVKIEQSDVAKDAGPTVTGAAAGGGSVPGIVVKEDATKIFTENLQTSGAYSAREESLKKEEETGKLKFACLSNDGVDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPYASQRFGEIAFCAITADEQVKGYGTRLMNHLKQYARDVDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVYTGIDFHKREAGVPKKIIDDIPGLREAGWTLDQWGHSRFRTLGGSTDNATNLKHLTMLMRQLLKSMLDHADAWPFKEPVDARDVPDYYEIIKDPMDLKTMSKRVESEQYYVTFEMFVEDVKRMFSNARTYNSPETIYYKCATRLEAHFQSKVTSFLQSGAKVQ 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03636 541 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 199 346 IPR000182 GO:0016407
Tsu07g03636 541 SMART bromo_6 426 535 IPR001487 GO:0005515
Tsu07g03636 541 PANTHER BNAC04G26160D PROTEIN 3 541 - -
Tsu07g03636 541 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 204 351 IPR016181 -
Tsu07g03636 541 Gene3D - 421 540 IPR036427 GO:0005515
Tsu07g03636 541 MobiDBLite consensus disorder prediction 1 133 - -
Tsu07g03636 541 ProSitePatterns Bromodomain signature. 450 508 IPR018359 -
Tsu07g03636 541 Pfam Bromodomain 437 520 IPR001487 GO:0005515
Tsu07g03636 541 MobiDBLite consensus disorder prediction 53 68 - -
Tsu07g03636 541 Gene3D - 188 352 - -
Tsu07g03636 541 MobiDBLite consensus disorder prediction 8 32 - -
Tsu07g03636 541 SUPERFAMILY Bromodomain 422 534 IPR036427 GO:0005515
Tsu07g03636 541 MobiDBLite consensus disorder prediction 76 95 - -
Tsu07g03636 541 CDD NAT_SF 239 293 - -
Tsu07g03636 541 Pfam Acetyltransferase (GNAT) family 239 317 IPR000182 GO:0016407
Tsu07g03636 541 CDD Bromo_gcn5_like 436 530 - -
Tsu07g03636 541 PANTHER GH11602P 3 541 IPR037800 GO:0004402
Tsu07g03636 541 MobiDBLite consensus disorder prediction 98 132 - -
Tsu07g03636 541 PRINTS Bromodomain signature 448 461 IPR001487 GO:0005515
Tsu07g03636 541 PRINTS Bromodomain signature 497 516 IPR001487 GO:0005515
Tsu07g03636 541 PRINTS Bromodomain signature 478 496 IPR001487 GO:0005515
Tsu07g03636 541 PRINTS Bromodomain signature 462 478 IPR001487 GO:0005515
Tsu07g03636 541 ProSiteProfiles Bromodomain profile. 445 516 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03636 Tsu-Chr7 42577595 42590782 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Tsu07g03636 Bromodomain 5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03636 K06062 - gmx:100813942 917.916