Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03628 ATGGGAAAAAAAGATCGAAAGATCGAGAAACAACTTCAAAAGCAAATGGGATGTATGTCAGGTTTCTTACAAATCTTCGATCGCCATCAATTATTCCCCGGAAAACGCATCTACACCGTTAAAAGACTCCCTTCCACTAAATCAACGGAACCGGAAACAAACAGTAACTCACCCGCTGAATCAGAATCAACACCAGAAACACAAACACCACAACCAGAAAAACCGTCTCTACCGGTTCATTTCGATTTCAAAGAAGGAACAAGATCTCCATGGAAATTCACAAGAGAAGCACCAAGACTATCATTAGATAGCAGAGCAGTTATAGATGCAAAAGGAACAATTCAAATTCACccaaaagatgaagaaaaacgACGTCGTTCCACTTCAACAAGCGTCGTTGCAAAACTCATGGGTCTCGAAGACCCTGATCCTAACCCTAAGCTCCAAAAATCTGCTTCGGAATCAAGAGCTAACAGAGATCTATCACAAAATCAACAGTATCGTTTCTTTGACACTACGAATTTTCAGCTAAAGCAATTCGAAAATGCTTCATCTTTAAACGACAGTGTTTCAGATCTAAACGAGAAAACAGAACCAGTCAGAGGAGTTACAACAAGACAAAAGAAGATTTACTATGATTCTGCTGACTTTTTTCCTGGTCCGAAACAGAGTGTTTCTGTTTCTGTTCAAGGTGAGATTGAAAAAAGGTTGAAGATGCGTGGGATTCATGAACCTTCTAAAGATCTTGATACATTGAAACAAATCCTTGAAGCTTTGCAGCTTAAAGGTCTCTTACATTCCAAGAAATTAACAAATCATAGAAACTTTGTTATGGAGAATGTGAATGATTCTCATTCTCCAATTGTTGTGATGAAACCAGGAAGACCAATTAACCAAACCGGTTGGACCGGTTGCAATTCTCCATCACCAGCTTCCACTTTCCGGTCCAAGGTTAAAATTCGTCCGGATCATATTCAATCACAGATCAAAAATAGAAACAACACGAATTCCCCCACGCGCAGTCCCAATCGCGTGAGAAAGGTTACCATTACAAACAATGTTGATCTTAGAAGAGTTACTCCGGTTCATTCCTCGAGAAATGAACCGGACCGGAAAACACCGAACCGGTCACCAAGGATGAGAAAGAAGACTATGACAGAAGATGAATCATCCACCGTTTCTGATAGCTCTTCACATACCGATACAGAGAGGTCGATTAAGGTGGAGGAGCAATACAGAGAAGGGAAAGAGTTATTACAGAGATGTGATAAGTTACTGAACAGTATAGCGGAAATAACTGAGTTGCAACAACCGAGTCCAGTATCGGTACTTGACTCGTCGTTTTACAAGGATGACTCGTCGTGTTCACCGTCACCGGTAATGAAACGATGCATTGAATATAAAGATCTAGAAGCAGAGTCAGAAGATGAAACATGGAGTGCAACATTGTCTTGCAATGAAGCCAAGTCAGAGGATTGCGATTTCATATACATTTCAGAAGTACTGCGTGCTTCTAATTACTTGCCGGAAGACAATGACATGTTCTTGTTACTAGAACAACAACAATACCTCAAGGGAAACAATACTTCCAAAGTTTCCACTCTTCAAAGACGGTTAATCTTCGACACAATTCATGAGATCATCAACCGTAAACGACGTTTGCCGCCATGGAAGTTGGAGAATCTGCCGTCGTTAAAATTTATATGGACCGAATTTCGGAGAATCCGAGAAAGGGATGAGTCGGAGGACATGTTCGAGGTTATATGCGGAGTGTTGAGAAAGGACATGAGTGGAGAGAATGAATGGGGTGAATGTGACGTGGAAATTGGAGATGTCGTGTTGGACATCGAACGATTCATATTCAAAGATCTTATCGAAGAAACCATTAGAGATTTAGCGTTGTGTAATAAGGTACCACGTAACAAAGTTTCGATGCTCCGTAGGAAGCTAgagttttaa 1959 0.4028 MGKKDRKIEKQLQKQMGCMSGFLQIFDRHQLFPGKRIYTVKRLPSTKSTEPETNSNSPAESESTPETQTPQPEKPSLPVHFDFKEGTRSPWKFTREAPRLSLDSRAVIDAKGTIQIHPKDEEKRRRSTSTSVVAKLMGLEDPDPNPKLQKSASESRANRDLSQNQQYRFFDTTNFQLKQFENASSLNDSVSDLNEKTEPVRGVTTRQKKIYYDSADFFPGPKQSVSVSVQGEIEKRLKMRGIHEPSKDLDTLKQILEALQLKGLLHSKKLTNHRNFVMENVNDSHSPIVVMKPGRPINQTGWTGCNSPSPASTFRSKVKIRPDHIQSQIKNRNNTNSPTRSPNRVRKVTITNNVDLRRVTPVHSSRNEPDRKTPNRSPRMRKKTMTEDESSTVSDSSSHTDTERSIKVEEQYREGKELLQRCDKLLNSIAEITELQQPSPVSVLDSSFYKDDSSCSPSPVMKRCIEYKDLEAESEDETWSATLSCNEAKSEDCDFIYISEVLRASNYLPEDNDMFLLLEQQQYLKGNNTSKVSTLQRRLIFDTIHEIINRKRRLPPWKLENLPSLKFIWTEFRRIRERDESEDMFEVICGVLRKDMSGENEWGECDVEIGDVVLDIERFIFKDLIEETIRDLALCNKVPRNKVSMLRRKLEF 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03628 652 MobiDBLite consensus disorder prediction 327 360 - -
Tsu07g03628 652 MobiDBLite consensus disorder prediction 361 389 - -
Tsu07g03628 652 MobiDBLite consensus disorder prediction 148 165 - -
Tsu07g03628 652 MobiDBLite consensus disorder prediction 113 165 - -
Tsu07g03628 652 MobiDBLite consensus disorder prediction 42 74 - -
Tsu07g03628 652 MobiDBLite consensus disorder prediction 323 409 - -
Tsu07g03628 652 Pfam Domain of unknown function (DUF4378) 494 627 IPR025486 -
Tsu07g03628 652 MobiDBLite consensus disorder prediction 114 129 - -
Tsu07g03628 652 PANTHER LONGIFOLIA PROTEIN 5 652 IPR033334 GO:0051513
Tsu07g03628 652 PANTHER OS11G0587300 PROTEIN 5 652 - -
Tsu07g03628 652 MobiDBLite consensus disorder prediction 78 92 - -
Tsu07g03628 652 MobiDBLite consensus disorder prediction 38 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03628 Tsu-Chr7 42520314 42524655 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03628 63 652 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 38.806 2.42e-108 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03628 - - lja:Lj1g3v4449210.1 661.759