Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03627 AtgagtttggaaaagaatccaTGTGTATTTTTTGATGTATCAATTGACGGGGATGTTGAAAGAATTGTTATTGAGCTTTTTTCTAGCATAGTTCCTAAGACAGCGGAGAATTTTCGGGCACTTTGTAcagGCGAGAAGGGGATTGGAGAAGCAACCGGGAAACCTTTGCATTATAAAGGAGCATATTTTCATCGTATAATTAAAGGTTTTATGGCTCAAGGTGGTGATTTTTCAAAGGGCAATGGCACTGGTGGAGAAAGTATATATGGAGGAAAGTTTGCAGatgaaaatttcaaaCTAAAACATGACGGACCTGGTGTCCTTTCTATGGCTAATTCTGGTCCTAACACCAATGGATCTcagttttttattatattcaaGAGCCAGCCTCATCTTGATGGGAAACATGTTGTTTTTGGAAAAGTTACCAAGGGAATAGAGATTCTGAAGAAAATGGAGCAGCTGGGAACGGAAAACGGGAAACCTACCCagccaataaaaattgttgattGTGGTGAAGTCTCTAAAGCAAAAACTCCACATACTGTTGAGAAGGAGAAAGAGAAAAGGAGAAAGTCATTGAAATCCGTAACTTCTGATGATAGTTCTGATGCTGGCAAAAAGTTaagtagaaaaagaaaaacatcttCCAAAGACAGGAGGAAGAGAAGGAAGAGATACTCATCGTCTGATAGTGACAGTGACAGTTATTCGTCAGATTCGGAATCAGATTCTGCTTCAGATTCGGAATCAGATTCACCTTATTCTGATTCAAGTTCTTCTAGCTATGGGAAACACCAGAAGAGGAAAAGAAGTAAACGCAGGCATGGGAAGAAGAGAAGTATTGGACGTAAGCAGAAAAGAAGCAAGCACAGTCGTAGAAGATCAAGACACAAGTCTAAAAGGAGTTCTGAAGGTTTGAGTGATTCAGAAAGTGACAGTTCTAGTGCTAGTGACAGTAGTTCTGGTGATAGGAAAGCTGATCGTCATGTCTCTGGTCATAAAAAACAAGCTGacaacaaaactaaaaaaaacctAGggtcagaaaagcaatctTCTAGCCTTCCCTTACAAAGTCCAACTCGTCCAGAACTAGAGGTGGATCCCAAGGTTAGAACGACTGTGAAAAAGCAATCACACGAAGAAGGTGAGTTGTCTCCAGAAAACGGTGAGTTTATGAATAACGGGAATGATGCTGAAGCTGAATTTAATAAACCTGCTGATCAACGGGCTTATTCAGATGATTCAAATCACAATAGAGATACGAGTCCTGGAAGAAGTCCTACTAGGAGTCCTACCAAGAGTTCTAGAGAGCTGAACCAAGGACGTGCTCTATTGGCTAGTCCTGACCATAAAGCATCTGAACCTGCTGCCTCCAAACATGGCCAGGGCATTTCAAAAAGCCCTTCGCCAAATGGTATGTCAAAGCGCGTTAAAAAAGGACGAGGCTTTACTGAGCGCTTTGCCTTTGTACGCCGATACCGTACTCCATCTCCAGAGCAGTCTCCTCGTTCATATCGTTATGGGGATAGAAATATTAGAAGGAACTTTGATAGAAATACAAGCCGCAGAAGTTATTCTGAGCGCTCGCCACCACGACGTTTTCGCAGCCCACCGAGGGGCAGCCGTCCCAGATATCAAAGTAGAAGAAGTCGGAGCAGAAGTATCTCCCGCAGTCCAGTACGCGGCCGTTATAGAGACAATGGTCGTGGCCGGAGTCCAATACGCAGTGTTAGCCCGGAAGAAAGGCGACCTCCCATAAGTGACAGATTAAAATCCCGACTTGGTGCACGAGGTAGTCAACAATCTCCAGACAGAGCGAGGTCAAAGTCAAATTCGAGAAGCAAGGGATCTTCTCGTTCCAGATCCCCTGATGCTATACCCCCGAGACGTTATGATAAAAGGACTTCCATATCTCGTAGCAGGTCCAGATCAAGCTCATCTGGACACAAGGGTTTGGTTTCCTATGGAGATGCTAGTCCCGATTCAGGGGCTAGGTAG 2001 0.4158 MSLEKNPCVFFDVSIDGDVERIVIELFSSIVPKTAENFRALCTGEKGIGEATGKPLHYKGAYFHRIIKGFMAQGGDFSKGNGTGGESIYGGKFADENFKLKHDGPGVLSMANSGPNTNGSQFFIIFKSQPHLDGKHVVFGKVTKGIEILKKMEQLGTENGKPTQPIKIVDCGEVSKAKTPHTVEKEKEKRRKSLKSVTSDDSSDAGKKLSRKRKTSSKDRRKRRKRYSSSDSDSDSYSSDSESDSASDSESDSPYSDSSSSSYGKHQKRKRSKRRHGKKRSIGRKQKRSKHSRRRSRHKSKRSSEGLSDSESDSSSASDSSSGDRKADRHVSGHKKQADNKTKKNLGSEKQSSSLPLQSPTRPELEVDPKVRTTVKKQSHEEGELSPENGEFMNNGNDAEAEFNKPADQRAYSDDSNHNRDTSPGRSPTRSPTKSSRELNQGRALLASPDHKASEPAASKHGQGISKSPSPNGMSKRVKKGRGFTERFAFVRRYRTPSPEQSPRSYRYGDRNIRRNFDRNTSRRSYSERSPPRRFRSPPRGSRPRYQSRRSRSRSISRSPVRGRYRDNGRGRSPIRSVSPEERRPPISDRLKSRLGARGSQQSPDRARSKSNSRSKGSSRSRSPDAIPPRRYDKRTSISRSRSRSSSSGHKGLVSYGDASPDSGAR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03627 666 MobiDBLite consensus disorder prediction 157 666 - -
Tsu07g03627 666 MobiDBLite consensus disorder prediction 322 346 - -
Tsu07g03627 666 MobiDBLite consensus disorder prediction 232 262 - -
Tsu07g03627 666 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 172 IPR002130 GO:0000413|GO:0003755
Tsu07g03627 666 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 173 IPR002130 GO:0000413|GO:0003755
Tsu07g03627 666 MobiDBLite consensus disorder prediction 560 591 - -
Tsu07g03627 666 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 58 75 IPR020892 GO:0003755|GO:0006457
Tsu07g03627 666 MobiDBLite consensus disorder prediction 211 225 - -
Tsu07g03627 666 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 4 401 - -
Tsu07g03627 666 SUPERFAMILY Cyclophilin-like 4 174 IPR029000 -
Tsu07g03627 666 MobiDBLite consensus disorder prediction 536 559 - -
Tsu07g03627 666 MobiDBLite consensus disorder prediction 403 421 - -
Tsu07g03627 666 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 4 401 - -
Tsu07g03627 666 MobiDBLite consensus disorder prediction 595 622 - -
Tsu07g03627 666 MobiDBLite consensus disorder prediction 626 640 - -
Tsu07g03627 666 MobiDBLite consensus disorder prediction 507 535 - -
Tsu07g03627 666 MobiDBLite consensus disorder prediction 177 210 - -
Tsu07g03627 666 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 106 121 IPR002130 GO:0000413|GO:0003755
Tsu07g03627 666 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 133 IPR002130 GO:0000413|GO:0003755
Tsu07g03627 666 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 63 75 IPR002130 GO:0000413|GO:0003755
Tsu07g03627 666 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 26 41 IPR002130 GO:0000413|GO:0003755
Tsu07g03627 666 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 134 149 IPR002130 GO:0000413|GO:0003755
Tsu07g03627 666 MobiDBLite consensus disorder prediction 265 301 - -
Tsu07g03627 666 MobiDBLite consensus disorder prediction 365 387 - -
Tsu07g03627 666 MobiDBLite consensus disorder prediction 422 442 - -
Tsu07g03627 666 CDD cyclophilin_ABH_like 7 172 - -
Tsu07g03627 666 Gene3D - 1 181 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03627 Tsu-Chr7 42507218 42513211 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03627 1 182 U-box Gene Family AT5G67530 46.277 8.54e-36 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03627 K09566 - gmx:100791082 720.694