Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03624 ATGTCTAACAATCATAATCTACAATATGATGGTAGTTCATTTATCATTGACATCACAAGCACCCTTACCAAAGTTACTTCTAAATACACAAACAATGCAAAAAGAAGATGGCGTTTTGCATATACAGCTATTTATTCTAGAAGGGTTATGCTTTCTCTTGCAAAAGAAGTCATATCTAGAAAAAATCCAAATCACTATAGAAAACTTTTTCACACAGAATCTTCTTCTAGTACAAACACCACTCTTGATATAATTGAACCACTAATAATTACACAACATAATGGAACCAAAGCCAAAACCAATGATTACTCTTTGGTTTCTGATTTTGTTGATAAAACCAAACTTGCTGATATGGTTAAGGACAAAAACTTGAAGTCCTTAAGTGAGTTTGGTGGAGTTGAAGGTGTAGGACATGTTCTTGGAACAGTTCTTAACAAAGGAATCATTGGAAGTGACGACGATATTTCGAGGCGGATCGAGTTGTTTGGTTCAAATACTTACAAAAAGCCACCACCAAAAGGTCTTTTACATTTTGTACTTGAAGCTTTCAATgatactactattattattcttctTGTTTGTGCTGGTCTTTCCCTTGGTTTTGGTATAAAAGAACATGGTGCAGGGGAAGGTTGGTATGAAGGTGGAAGTATATTTCTTGCAGTTTTTCTTGTTGTGGTTGTAAGTGCACTAAGCAATTTCAGACAAGAAAGACAATTTCACAAATTGTCTAAGATAAGTAACAATATCAAAGTTGAAGTTGTTAGAAATGGAAGGCCACAAAAGATATCAATCTTTGATGTTCTTGTGGGAGATATTGTGTCTCTCAAAATTGGTGATCAAATTCCAGCTGATGGAGTTTTTTTATCAGGTCATTCACTGCAAGTGGATGAATCTAGCATGACAGGTGAGAGCGATCATGTAGAGATTGAGCATTTAAGAGCACCTTTTTTGTTGTCCGGGTCAAAAGTTGTGGATGGATATGCTCAAATGCTTGTAACATCTGTGGGAAAAAACACATCATGGGGTCAAATGATGAGCTCGATAACCCGAGACACTAACGAAAGAACCCCGTTACAAGCACGCCTTGACAAGTTAACCTCTTCGATCGGAAAGGTTGGACTTGCAGTAGCGTTTCTTGTTCTTTTAGTGTTGTTGATTCGTTATTTTACCGGTAACTCACAAGAAGATAAAGGGCATACGAAGTTTCGAGGAAGCAAAACCGATATAAACGATGTTTTAAATTCTGTTGTGAGTATTGTTGCAGCTGCAGTCACTATTGTGGTTGTGGCTATCCCTGAGGGTTTGCCATTGGCTGTGACACTCACACTTGCTTACTCCATGAAAAGAATGATGGCAGATAATGCTATGGTGAGGAAACTTTCTGCTTGTGAAACTATGGGATCAGCAACAGTTATCTGCACTGATAAAACTGGTACCTTGACATTAAATCAAATGAGGGTCACCAAGTTTTGTCTTGGCATTGAAAACTTTACCGATATTTTTTCCAATGCAATGGCTCCAAAAGTTCTTGAATTGTTCCATCAAGGGGTAGGCCTTAATACAACTGGTAGTGTCTACAATCCTCCATCAGGATCCGAACCTGAAATTTCGGGTAGTCCAACAGAGAAAGCTATACTCTTGTGGGCTGTATCGGAATTAGGTATGAACATGGATGAAATGAAACAGAAACATAAAGTCCTTCATGTTGAAACATTTAACTCAGAGAAGAAACGAAGCGGCGTTGTGGTAAAGAAGGAGAACGACGACCGAGTTCATGTGCATTGGAAAGGAGCTGCAGAGATGGTACTAGCAATGTGTACAAGCTATATTGATAGTAACGGAGTGAGGAAATCCCTTGTTGATGAAGAAAGGAGCAAAATTGAGACGATAATCCAAGGTATGGCTGCTAGTAGTCTAAGATGTATTGCTTTTGCTCACATGGAGATTTCAGATTCAGAAGATAATGATTATATGATCACAAGGGAGAAAAAAACACATCAAAGCCTAAGGGAAGATGGATTGACCTTGCTTGGCATTGTTGGCCTCAAGGATCCATGCAGACCAAATACAAAGAAAGCTGTGGAAACTTGCAAAGCTGCAGGAGTTGAAATTAAGATGATCACCGGCGATAACATATTCACCGCAAAGGCAATAGCAACAGAATGTGGAATATTAGATCCTAAAAATGCCAATGCTGGAGAAGTTGTGGAAGGTGTGGAGTTCAGAAACTATACAGAAGAAGAGAGAATGGAGAAAGTCGATAAGATCCTAGTATTGGCAAGATCATCCCCTATGGACAAACTTTTGATGGTGCAATGCTTAAGAAAGAAAGGCCATGTAGTTGCAGTCACAGGCGACGGTACAAACGATGCACCTGCACTAAAAGAAGCTGATATAGGTCTTTCTATGGGAATCCAAGGAACCGAAGTTGCCAAAGAAAGTTCTGATATCGTTATCTTAGACGACAACTTCAATTCGGTTGCAACTGTTTTAAGATGGGGAAGATGTGTTTACAACAACATCCAGAAATTTATTCAGTTTCAACTAACAGTGAATGTTGCAGCACTTGTGATAAACTTTATTGCAGCAGTATCATCCGGTGATGTTCCTTTAACAACAGTTCAACTTCTTTGGGTGAATCTCATTATGGATACATTAGGTGCTTTGGCATTAGCAACAGAAAGACCTACAAAAGAGTTAATGAAGAAAAAGCCGATTGGTAGAACCGAACCTCTTATCACAAACATTATGTGGAGAAACCTTTTAGCTCAAGCTTCATATCAAATTGCAGTCCTTCTTATTATGCAGTTTTATGGAAAATCAATCTTCAATGTAAGTAAGGAGGTAAAAAATACACTAATCTTTAATACTTTTGTTCTCTGCCAAGTTTTCAATGAGTTCAACTCAAGGAGCATGGAGAAACTCTATGTATTCGAAGGCATTCTGAAAAACCATCTGTTTATTGGAATAATTGGGATTACTATTGTTCTTCAAATCTTGATGGTGGAACTGCTAAGGAAATTTGCTGATACAGAAAGATTAACATGGGAGCAATGGGGAATTTGTATCGGCATTGCAGTTGTTTCATGGCCACTTGCTTGCATAGTAAAGCTCATACCAGTTTCAGATAAACCTTCATTCAGCTATACTAAGTGGATTAAATTATTAGTTGTTAAGATTAAGAAGGCTTTTTAA 3198 0.378 MSNNHNLQYDGSSFIIDITSTLTKVTSKYTNNAKRRWRFAYTAIYSRRVMLSLAKEVISRKNPNHYRKLFHTESSSSTNTTLDIIEPLIITQHNGTKAKTNDYSLVSDFVDKTKLADMVKDKNLKSLSEFGGVEGVGHVLGTVLNKGIIGSDDDISRRIELFGSNTYKKPPPKGLLHFVLEAFNDTTIIILLVCAGLSLGFGIKEHGAGEGWYEGGSIFLAVFLVVVVSALSNFRQERQFHKLSKISNNIKVEVVRNGRPQKISIFDVLVGDIVSLKIGDQIPADGVFLSGHSLQVDESSMTGESDHVEIEHLRAPFLLSGSKVVDGYAQMLVTSVGKNTSWGQMMSSITRDTNERTPLQARLDKLTSSIGKVGLAVAFLVLLVLLIRYFTGNSQEDKGHTKFRGSKTDINDVLNSVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADNAMVRKLSACETMGSATVICTDKTGTLTLNQMRVTKFCLGIENFTDIFSNAMAPKVLELFHQGVGLNTTGSVYNPPSGSEPEISGSPTEKAILLWAVSELGMNMDEMKQKHKVLHVETFNSEKKRSGVVVKKENDDRVHVHWKGAAEMVLAMCTSYIDSNGVRKSLVDEERSKIETIIQGMAASSLRCIAFAHMEISDSEDNDYMITREKKTHQSLREDGLTLLGIVGLKDPCRPNTKKAVETCKAAGVEIKMITGDNIFTAKAIATECGILDPKNANAGEVVEGVEFRNYTEEERMEKVDKILVLARSSPMDKLLMVQCLRKKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFNSVATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFIAAVSSGDVPLTTVQLLWVNLIMDTLGALALATERPTKELMKKKPIGRTEPLITNIMWRNLLAQASYQIAVLLIMQFYGKSIFNVSKEVKNTLIFNTFVLCQVFNEFNSRSMEKLYVFEGILKNHLFIGIIGITIVLQILMVELLRKFADTERLTWEQWGICIGIAVVSWPLACIVKLIPVSDKPSFSYTKWIKLLVVKIKKAF 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03624 1065 Gene3D - 471 830 IPR023214 -
Tsu07g03624 1065 PANTHER CATION TRANSPORTING ATPASE 23 1029 - -
Tsu07g03624 1065 SUPERFAMILY Calcium ATPase, transmembrane domain M 130 1043 IPR023298 -
Tsu07g03624 1065 PANTHER CALCIUM-TRANSPORTING ATPASE 23 1029 - -
Tsu07g03624 1065 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 99 1042 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Tsu07g03624 1065 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 218 391 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu07g03624 1065 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 759 865 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu07g03624 1065 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 416 505 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu07g03624 1065 Pfam Cation transporting ATPase, C-terminus 870 1040 IPR006068 -
Tsu07g03624 1065 Pfam E1-E2 ATPase 250 452 - -
Tsu07g03624 1065 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 480 690 IPR023299 GO:0000166
Tsu07g03624 1065 PRINTS P-type cation-transporting ATPase superfamily signature 297 311 - -
Tsu07g03624 1065 PRINTS P-type cation-transporting ATPase superfamily signature 679 690 - -
Tsu07g03624 1065 PRINTS P-type cation-transporting ATPase superfamily signature 785 804 - -
Tsu07g03624 1065 PRINTS P-type cation-transporting ATPase superfamily signature 809 821 - -
Tsu07g03624 1065 PRINTS P-type cation-transporting ATPase superfamily signature 474 488 - -
Tsu07g03624 1065 PRINTS P-type cation-transporting ATPase superfamily signature 701 711 - -
Tsu07g03624 1065 Pfam haloacid dehalogenase-like hydrolase 472 799 - -
Tsu07g03624 1065 ProSitePatterns E1-E2 ATPases phosphorylation site. 476 482 IPR018303 -
Tsu07g03624 1065 Pfam Cation transporter/ATPase, N-terminus 132 198 IPR004014 -
Tsu07g03624 1065 SUPERFAMILY HAD-like 472 890 IPR036412 -
Tsu07g03624 1065 CDD P-type_ATPase_Ca_PMCA-like 155 918 - -
Tsu07g03624 1065 SFLD p-type atpase 456 838 IPR044492 -
Tsu07g03624 1065 Gene3D - 484 686 IPR023299 GO:0000166
Tsu07g03624 1065 Gene3D - 181 1039 - -
Tsu07g03624 1065 PRINTS Sodium/potassium-transporting ATPase signature 594 612 - -
Tsu07g03624 1065 PRINTS Sodium/potassium-transporting ATPase signature 218 238 - -
Tsu07g03624 1065 PRINTS Sodium/potassium-transporting ATPase signature 467 488 - -
Tsu07g03624 1065 SUPERFAMILY Calcium ATPase, transduction domain A 249 348 IPR008250 -
Tsu07g03624 1065 SMART Cation_ATPase_N_a_2 129 203 IPR004014 -
Tsu07g03624 1065 Gene3D - 151 350 - -
Tsu07g03624 1065 SFLD C1.7: P-type atpase like 456 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03624 Tsu-Chr7 42468877 42472569 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03624 33 1052 Primary Pumps ATPases AT3G63380 69.501 0.0 1349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03624 K01537 - gmx:100790034 1596.25