Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03619 ATGCAGCACGAAATCATAAGATTGAATGAAAGAAGATCAATATCTTTGAGAAGGACCCAGCTGCGTTGCGGTTTCGGCCACATAAAAAACGATGCGGCTGGAACTGGCTCAACTGCGGCGGCGTTGCAGTTTCGGCCACATAAAAAACGACTCAGGACAAATAAGCATAGCTTTAGAGTACATGGATGGAGTCACTTGCTGATATTTTGCGAACACATAGAACGATACCCGAACCTATTTATCATCCATGTTTCAGAAGCTATATTACATGGTCTAATCTATCTTCATGGGGTCAGATATTTAGTTCATAGAGACATAAAGCCTGCTAATTTACTTGTAAATCTCAAGGGAGAGCCGAAAATTACCGATTTTGGTATTAGTGTTGGTTTAGAGAACTCGGCTGCAATGTGTGCTACATTCGTTGGAACTGTTACGTACATGTCACCTGAGCGAATTCGAAATGAAAGCTATTCTTATCCGTCTGTTATTTGGAGCCTCAGTCTTGCACTTCTCGAGTGTGGTACAGGAGAATTCCCATATACAGCTAATGAAGGTCCTGTCAATCTTATGTTACAGATCCTTGATGATCCATCACCATCTCCATCAAAAGAGAAGTTTTCACCTGAATTCTGCTCCTTTTTCGTTGCATGTTTACAGAAGGATCCAGATAACAGACCAACGGCAGAGCAGTTTCTCGGGGAAACAACATTTGCGACGGCTATCTTTAGCTCGGTTATAGCTTGTTATCACAAGcataagaagaagaaggtggaTGCGGTGTGTGCCGACGCCGACCACAATCTGAAGGTCCGCGGCGAGCCCCTTTGGATCCCTGTGGAGATAGAGTTTAACCTTAGTTCCGATGGATCTAATGCAAAAGTTAAAGTCGTGAATGAAGATGTCGGTGGTAGCTTGTTATCACAAGCATATGAAGAAGAAGGTGGATGCGGTGTGTGCCGACGCCGACCACAATCCGAAGGTCCGCGGCGAGCCCTTTCAAATCCCTTTGGAGATGGAGTTCAACCTTAG 1029 0.4363 MQHEIIRLNERRSISLRRTQLRCGFGHIKNDAAGTGSTAAALQFRPHKKRLRTNKHSFRVHGWSHLLIFCEHIERYPNLFIIHVSEAILHGLIYLHGVRYLVHRDIKPANLLVNLKGEPKITDFGISVGLENSAAMCATFVGTVTYMSPERIRNESYSYPSVIWSLSLALLECGTGEFPYTANEGPVNLMLQILDDPSPSPSKEKFSPEFCSFFVACLQKDPDNRPTAEQFLGETTFATAIFSSVIACYHKHKKKKVDAVCADADHNLKVRGEPLWIPVEIEFNLSSDGSNAKVKVVNEDVGGSLLSQAYEEEGGCGVCRRRPQSEGPRRALSNPFGDGVQP 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03619 342 MobiDBLite consensus disorder prediction 321 342 - -
Tsu07g03619 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 101 113 IPR008271 GO:0004672|GO:0006468
Tsu07g03619 342 SUPERFAMILY Protein kinase-like (PK-like) 71 246 IPR011009 -
Tsu07g03619 342 ProSiteProfiles Protein kinase domain profile. 1 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03619 342 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 82 234 - -
Tsu07g03619 342 Gene3D Transferase(Phosphotransferase) domain 1 66 266 - -
Tsu07g03619 342 PANTHER - 82 234 - -
Tsu07g03619 342 Pfam Protein kinase domain 83 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03619 342 SMART serkin_6 27 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03619 Tsu-Chr7 42354141 42359540 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03619 88 258 MAP Kinase Kinase Gene Family AT5G40440 76.023 7.87e-87 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Tsu07g03619 Pkinase 2.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03619 K20607 - rcu:8281784 260.766