Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03613 ATGGTTAATGGTGATTTTGCTTACCCTTCAACTATGAATGTTGAGAGTGTGCACCGTGTGGCAATACCACCACCACAACCATTTATAAAGTCACTTCAATATTCTATGAAAGAAACATTTTTTCCAGATGACCCATTGAGAAAGTTCAAGAACCAATCAGCTTCAAAGAAATTTGTGCTTGctcttcaacatttttttccaattttggAGTGGGCTCCTAGGTACACAATTCCGTTCTTGAAATCTGACATAATTGCTGGAATCACCATTGCTAGTTTGGCTATTCCTCAAGGGATTAGTTATGCTAAGCTTGCTAATCTTCCTCCAATTCTTGGACTTTATTCAAGCTTTATACCACCATTGATTTATGCAATGATGGGTAGCTCGAGGGATTTGGCAGTTGGAACTGTGGCGGTTGGATCACTTCTAATGGCTTCCATGTTAGGTCGTGAAGTTAATCCAAATGAGAATCCAAAGCTTTTTCTCCACCTTGCTTTTACAGCTACATTCTTTGCTGGAGCTCTACAGTTATCACTCGGCCTCTTTAGGTTGGGGTTTATAGTGGATTTTCTATCACATGCAGCAATTGTAGGGTTCATGGGAGGAGCAGCCACAGTGGTTTGTCTTCAACagctaaaatcaattttaggaCTTGAACATTTTACGCACAAAGCTGATATTGTGTCAGTTATGAGTTCTGTTTTCACACAAACTCGTGAGTGGAGGTGGGAAAGTGCAGTGTTGGGATGttgctttatttttttcctcCTCGTCACAAGATACATCAGCAAACAACGACCGAAGTTCTTTTGGGTCTCAGCAATGGCGCCACTAACATCAGTTATATTGGGAAGTCTGCTGGTTTATCTCACTCACGCTGAGAAGCACGGTGTTCAAGTGATAGGAGAATTGAAAAAGGGGCTTAATCCACCTTCAGCAACAGATTTAGTGTTTGTGTCACCATATATGGGCACAGCCATCAAAACTGGACTCATTATTGGTATAATAGCTCTTGCGGAAGGAATAGCAGTTGGAAGAAGCTTTGCAATGTTTAAGAATTACCATATTGATGGCAATAAAGAAATGATAGCTTTTGGTACCATGAATATTTTGGGTTCATTAACCTCTTGTTACCTCACAACAGGACCATTTTCGCGTTCGGCCGTGAACTACAATGCCGGGTGCAAAACTGCAGTATCAAATATTGTAATGTCAATAGCAGTGATGTTGACATTATTATTCCTAACACCTTTGTTTCATTACACTCCTTTAGTGGTACTATCAGCCATTATTGTATCTGCAATGCTTGGACTTATAGATTATCAAGCAGCAATTCATTTGTGGAAAAttgacaaatttgattttttagtaTGCTTTAGTGCATATATTGGAGTTGTCTTTGGAAGTGTTGAAATTGGCTTAGTAATAGCAGTTGCATTATCTGTGCTTAGAGTACTTTTATTTGTTGCAAGGCCTAGAACATTTGTTTTAGGAAACATTCCAAATTCTTCAGCATACAGAAATGTTGAACATTATCCAAATGCACATCATGTTCCTGGAATACTAATTCTTGAAATTGATGCACCAATTTACTTTGCTAATGCAAGCTATTTAAGAGAAAGGATCACAAGGTGGATTgatgaagaggaagagagaCTTGAAGGTGCAGGGAAGACCAGTTTGGAGTATGTTATTGTGGATATGTCCGCTGTTGCAAACATTGATACAAGTGGAATAAGCATGCTTGAAGAGTTCAAGAAGTCAATCGACCGAAAAGGGCTACAACTCGTTTTGGTCAACCCCGGAAGCGAGGTGACGAAGAAACTGAACAAATCAAAGTTCCTTGATGAAATAGGACACAAATGGGTTTATGTGACAGTTGAAGAAGCTGTTGGAGTATGCAGCTTCATGCTTGGTACACACAAGGCTAATCTCAAGAAAGATGAACCAGAAGGTTTGAACAGTGTGTGA 1971 0.3785 MVNGDFAYPSTMNVESVHRVAIPPPQPFIKSLQYSMKETFFPDDPLRKFKNQSASKKFVLALQHFFPILEWAPRYTIPFLKSDIIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMASMLGREVNPNENPKLFLHLAFTATFFAGALQLSLGLFRLGFIVDFLSHAAIVGFMGGAATVVCLQQLKSILGLEHFTHKADIVSVMSSVFTQTREWRWESAVLGCCFIFFLLVTRYISKQRPKFFWVSAMAPLTSVILGSLLVYLTHAEKHGVQVIGELKKGLNPPSATDLVFVSPYMGTAIKTGLIIGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAFGTMNILGSLTSCYLTTGPFSRSAVNYNAGCKTAVSNIVMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYQAAIHLWKIDKFDFLVCFSAYIGVVFGSVEIGLVIAVALSVLRVLLFVARPRTFVLGNIPNSSAYRNVEHYPNAHHVPGILILEIDAPIYFANASYLRERITRWIDEEEERLEGAGKTSLEYVIVDMSAVANIDTSGISMLEEFKKSIDRKGLQLVLVNPGSEVTKKLNKSKFLDEIGHKWVYVTVEEAVGVCSFMLGTHKANLKKDEPEGLNSV 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03613 656 PANTHER SULFATE TRANSPORTER 4 654 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tsu07g03613 656 SUPERFAMILY SpoIIaa-like 512 634 IPR036513 -
Tsu07g03613 656 PANTHER SLC26A/SULP TRANSPORTER-RELATED 4 654 - -
Tsu07g03613 656 Pfam STAS domain 512 630 IPR002645 -
Tsu07g03613 656 ProSiteProfiles STAS domain profile. 511 634 IPR002645 -
Tsu07g03613 656 Pfam Sulfate permease family 80 460 IPR011547 GO:0016021
Tsu07g03613 656 TIGRFAM sulP: sulfate permease 67 630 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tsu07g03613 656 Gene3D STAS domain 491 636 IPR036513 -
Tsu07g03613 656 CDD STAS_SulP_like_sulfate_transporter 512 627 - -
Tsu07g03613 656 ProSitePatterns SLC26A transporters signature. 109 130 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03613 Tsu-Chr7 42278735 42286706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03613 10 644 Inorganic Solute Cotransporters AT4G02700 68.239 0.0 903
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03613 K17471 - gmx:100791091 1113.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03613 07 42278735 42286706 Tsu07g03613 07 42278735 42286706 ECH
Tsu07g03613 07 42278735 42286706 Tsu01g02808 01 33503238 33512023 PCT