Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03594 ATGATCAAAAACTTCAACACTCTCTACCACCACCACAACCAAAACACTTCTCCCGAACCTGATTCCGAACCTCAACCCGCCGATTTCGCAACCGCCTTTGCCTCCAAccgtttctttttctcttcccCCGGTCGCTCCAACTCCATCATTGAATCCTCCTCGTCTTCCTCTTCCTCCTCGTCATTAACCGCCACCGTGTCAGTGCCGGTTAATGATTCCGAAAATTACAAGAATAAAGCAATTTTCGACGGAAGTGTGGCGGTTCCAACTTACTCGCCGGATCCTTACATGGATTTCCGGCGGTCAATGCAAGAAATGGTGGAAGCAAGACCGGAGTTGATGAACGATGTGAAATCCAATTGGGATACATTACACGAGCTTCTTCTTAGTTATCTTGCTCTTAATCCAAAAAGTACACATAAATTCATTCTCTGTGCTTTTTCTGATCTTATTGTTACTCTTAtgtcattttcttcttcatcttcttcttctggttCTTATCTACCACCGCCACAGAGTTCCAACAGTGGTGGCTGTGGTGGTGAATGTTAA 552 0.4112 MIKNFNTLYHHHNQNTSPEPDSEPQPADFATAFASNRFFFSSPGRSNSIIESSSSSSSSSSLTATVSVPVNDSENYKNKAIFDGSVAVPTYSPDPYMDFRRSMQEMVEARPELMNDVKSNWDTLHELLLSYLALNPKSTHKFILCAFSDLIVTLMSFSSSSSSSGSYLPPPQSSNSGGCGGEC 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03594 183 MobiDBLite consensus disorder prediction 161 183 - -
Tsu07g03594 183 Pfam Transcriptional repressor, ovate 92 154 IPR006458 -
Tsu07g03594 183 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 11 162 IPR038933 GO:0045892
Tsu07g03594 183 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 86 155 IPR006458 -
Tsu07g03594 183 ProSiteProfiles OVATE domain profile. 88 153 IPR006458 -
Tsu07g03594 183 PANTHER TRANSCRIPTION REPRESSOR OFP12 11 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03594 Tsu-Chr7 42114035 42114586 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tsu07g03594 Ovate 7.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03594 - - aprc:113871147 172.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03594 07 42114035 42114586 Tsu01g02847 01 34161408 34162115 PCT