Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03593 ATGCTTCTCAgtgaaaaacaacaaattgGAGATGATTTTAGCTGCAATTTTTTGAATATATTGCACAATAATGGCTCAAGTGCTTCAAAGTTGGATGTTGCAGTATCAATCATGGAGGAGAACTTTGGACATCCTTATAAGATTCATAGAGGTCGAAATATTTATTTCATCCCGGGCATTCTATTTAGCCAGTGGTCTAATTCGGCATATCGTAGTTTCGATGGATTTTTCACCATAACTCTAGAGAAAGGTGATGAGATTATTACTGTTGCGACCATAAGGATTCACGAAAATCATATGGCAGAGATGCCATACATTGCAACACGAGATGACCATAAGAACCAAGGAATGTGTCGTCGATTATTTCATGTTATTGAATCGTATTCAATAATATCAAGAATCAAAAAGTCATCGAAGGGAAACAAGTTGTTCACAAGATTACTGCAAAGAACCGTCGTGGTGGAAGCTCTTCTCGCCGCCGCGGAAGGCCACGAAAAGGATAGCTGCCGGAGAGTTTTTATTGCTTTAGATCATAGAACTTGTGTTGATGCAAATAATGATGAGACCGTTCATTTCAATCGTGCATTTATATGTGGAAAAAGATGTCAGGAGGTATTTGAAAGGCTTGAAATACTTCTAGGTGAAAATCACCAAATTGGAGATGATTTTTCTTGCAGTTTTTTGCGTAAATCACATGTTACAAGCTCAAGTGATTCAAAATTGGATGTTGTATTAACAATAATGTATGAATGCTTTCAACCATCATTTATCTATCATAAAGATCAGACCATTGAGACCATCCCTAGTATCCTATTTAGCCGTTGGACAAATTCTCCTTTTACTAACTTTGATGGATTTTTCACCGTAACTCTAGAGAAAGGAGATGAGATAATTAGTGTTGCAACTATCAGGattcataaaaatcaaatgGCAGAGATGCCATATATTGCAACAAGCCCTGAGCACAGAAAACAAGGAATGTGTCGTCTACTACTTAATGCTATTGAATCGGCACTAAGTTATTTAAATGTTCATATGTTGGTTATGCCATCTGAACCAAAAGTAGCACATACTTGGATttcttgttttggttttgagCCCCTTGACTTGGCCATGGAAAATTTCATCAAGTACGAAAAAGTTGTGCCATTTTCTGGTGTACAAATGCTACAGAAGAAGATACCAAATCATACCCCTTCTGgtgaaaatgtgaattttattgAAGTTTTCAATATTCACAAGAATAAAAAAGTggcaaaagaaaaacaacttcTCACCAAGTCGCGTGTTAGTGCTGAAGTTGATCATGAAATTATTACAAAGAAAAGTTGCGGTGAAAGCTCTTCGCATCGTAGGACATGA 1362 0.3473 MLLSEKQQIGDDFSCNFLNILHNNGSSASKLDVAVSIMEENFGHPYKIHRGRNIYFIPGILFSQWSNSAYRSFDGFFTITLEKGDEIITVATIRIHENHMAEMPYIATRDDHKNQGMCRRLFHVIESYSIISRIKKSSKGNKLFTRLLQRTVVVEALLAAAEGHEKDSCRRVFIALDHRTCVDANNDETVHFNRAFICGKRCQEVFERLEILLGENHQIGDDFSCSFLRKSHVTSSSDSKLDVVLTIMYECFQPSFIYHKDQTIETIPSILFSRWTNSPFTNFDGFFTVTLEKGDEIISVATIRIHKNQMAEMPYIATSPEHRKQGMCRLLLNAIESALSYLNVHMLVMPSEPKVAHTWISCFGFEPLDLAMENFIKYEKVVPFSGVQMLQKKIPNHTPSGENVNFIEVFNIHKNKKVAKEKQLLTKSRVSAEVDHEIITKKSCGESSSHRRT 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03593 453 Pfam Acetyltransferase (GNAT) family 275 339 IPR000182 GO:0016407
Tsu07g03593 453 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 231 394 IPR000182 GO:0016407
Tsu07g03593 453 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 178 438 - -
Tsu07g03593 453 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 1 127 - -
Tsu07g03593 453 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 241 372 IPR016181 -
Tsu07g03593 453 CDD NAT_SF 291 348 - -
Tsu07g03593 453 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 68 128 IPR016181 -
Tsu07g03593 453 PANTHER PHD FINGER PROTEIN 12 1 127 IPR042163 GO:0003714|GO:0045892
Tsu07g03593 453 Gene3D - 233 378 - -
Tsu07g03593 453 PANTHER PHD FINGER PROTEIN 12 178 438 IPR042163 GO:0003714|GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03593 Tsu-Chr7 42086181 42093406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03593 169 394 PHD Transcription Factor Family AT1G05380 36.975 2.32e-42 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03593 - - mtr:MTR_7g095140 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03593 07 42086181 42093406 Tsu01g02850 01 34178892 34190152 PCT