Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03574 ATGGCTGCCAAAGGAATGTGTGCCTCTATTCTTGATCCTGCTTCTACATCACCAACTCCCCAGGTTTACTTGGGTGAGGAATATGTAAACAATCCTAAACTTTCTGATGTCACATTCATAGTTGAAGGAAAAAGATTTTATGCTCATAGGTCTTGTTTACTTTCTTCTGATATATTTCGTGCAATGTTTGATGGAGGTTATCGGGAAAAGGAAGCCAAAGATATAGAGATTCCAAATATTAAATGGAATGTCTTTGAGTTGATGATGAGatttatatacACTGGAACAGTGGATGTTGATTTGGATATTGCTGTGGACCTCCTTAAAGCTGCAGATCAATATCTTCTTGACGGTCTTAAGCGTATTTGTGAATATACCATTTCTAAGGGTATTTCTGTGGAAAATGTTTCACTAATGTACGCGATGTCAGAGACTTTCAATGCTACATCGTTAAGATATTCATGCATACTCTTTGTCCTGAATCGATATGATAGCTTGAGTTCCAAACCATGGTATTCTCACTTTATTCGTTGTATTGTACCAGACATTCACAAATTCTTCTCAACTTTACTTACCACTAAATTTGGTCTTGTGGATCCTTAG 603 0.3648 MAAKGMCASILDPASTSPTPQVYLGEEYVNNPKLSDVTFIVEGKRFYAHRSCLLSSDIFRAMFDGGYREKEAKDIEIPNIKWNVFELMMRFIYTGTVDVDLDIAVDLLKAADQYLLDGLKRICEYTISKGISVENVSLMYAMSETFNATSLRYSCILFVLNRYDSLSSKPWYSHFIRCIVPDIHKFFSTLLTTKFGLVDP 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03574 200 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 PROTEIN 1 193 - -
Tsu07g03574 200 Pfam BTB/POZ domain 27 128 IPR000210 GO:0005515
Tsu07g03574 200 SMART BTB_4 35 131 IPR000210 GO:0005515
Tsu07g03574 200 ProSiteProfiles BTB domain profile. 35 101 IPR000210 GO:0005515
Tsu07g03574 200 Gene3D Potassium Channel Kv1.1; Chain A 24 160 IPR011333 -
Tsu07g03574 200 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 1 193 IPR044282 -
Tsu07g03574 200 SUPERFAMILY POZ domain 26 128 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03574 Tsu-Chr7 41910733 41932399 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Tsu07g03574 BTB 3.9e-24 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03574 - - qsu:112036025 283.878