Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03531 ATGCTCCCATTTCTAAAACATGTTCTTTTTGGGACCCCTTATCAACAATATCAAATTGAAGACCCTCTGGCATTTGATAATGACCCTCTAGCGTGGTCGAGGCCACTGGTTAGATATCACTCTGGCGAATTCTCCATGGCCGCGGTTCAGGCTAATGGGGATATGGAAGATAAGTGCCAAGTTGAAGTTGGCAATGATGCACTCTTTGTTGGAATTTATGATGGCCATAAAGGCGACACCGTTTCCATCTATCTTAGAGAACGTATCTTCAGGGAACTACTCAGGCTTATTCAGGTGAATAATAACAATATGAATGAGAATATTCTGACGCAAGTTGTTGATCGAATGGAGAGAGATTTTTTGGAGTCTGCTGGAAGAAATGTTTTTGTTAGTTCaggttgtttgatttgtttcataCGGAGAGGGAGGTTATATGCCGCCAACGTTGGAGATTCACGTGCTGTACTCGGTTCTCTGAAGGGCATTGGTCAACTTAAAAGATTGGTTGTTAAACAGATAGTTAAAGATCACAATCTTGATCGTCGAGATGTTCAAGTAGCACTCAGGCGCTTGCAGCCAGTTCTTCGTGATATAGATTACTATATTAATTTCCGTACCTGTGTATTTATGGCAGACAAAGGTTTAATCGACACAACTAGATGTATAGGATATAAATACTTGAAGGAGGAGATCAATGAAAGTGGATCATTTGAAATCCCGAGTTGGGAAAGAGTTCCTGGACGTTTTACAAGACCTTTGCTAACATCACAACCACATGTTTATTCAAGAATCTTAAGACACTCTGATAAATTCATTATATTTGGATCTAGTGGATTTTGGAAATTGATGTCAAATAGTGATGCTGCTAATGTTGTTAACACCAGTCCACGAGATGGAATCGCAGAAAGACTTGCCACACTTGCTTTACAGAAAGGGGCTAATATgaggagaagaaaatataatcAACTTATAGGGATGCCTAAGAGTAATCACATTAGTGGGTCGGACATACGCTATCACAATTATCATCATTTTAGACCGGCTTATCATGATGATATAACTGTGATTGTTGTGTATTTGGACCAAAGGCCAAATAGGGAGGGTGCGCTGCCAGAGATGAAATCCTATAGCGGCTGCGATGACGGATTTCAACAATCAGAGTTTAGAAATTTCTATAATAATGCTAATGCTTGA 1194 0.3869 MLPFLKHVLFGTPYQQYQIEDPLAFDNDPLAWSRPLVRYHSGEFSMAAVQANGDMEDKCQVEVGNDALFVGIYDGHKGDTVSIYLRERIFRELLRLIQVNNNNMNENILTQVVDRMERDFLESAGRNVFVSSGCLICFIRRGRLYAANVGDSRAVLGSLKGIGQLKRLVVKQIVKDHNLDRRDVQVALRRLQPVLRDIDYYINFRTCVFMADKGLIDTTRCIGYKYLKEEINESGSFEIPSWERVPGRFTRPLLTSQPHVYSRILRHSDKFIIFGSSGFWKLMSNSDAANVVNTSPRDGIAERLATLALQKGANMRRRKYNQLIGMPKSNHISGSDIRYHNYHHFRPAYHDDITVIVVYLDQRPNREGALPEMKSYSGCDDGFQQSEFRNFYNNANA 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03531 397 Pfam Protein phosphatase 2C 66 313 IPR001932 -
Tsu07g03531 397 Gene3D - 34 367 IPR036457 -
Tsu07g03531 397 ProSiteProfiles PPM-type phosphatase domain profile. 40 360 IPR001932 -
Tsu07g03531 397 CDD PP2Cc 55 360 IPR001932 -
Tsu07g03531 397 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 24 363 - -
Tsu07g03531 397 SUPERFAMILY PP2C-like 36 362 IPR036457 -
Tsu07g03531 397 SMART PP2C_4 30 358 IPR001932 -
Tsu07g03531 397 PANTHER ALPHABET, ISOFORM E-RELATED 24 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03531 Tsu-Chr7 41482638 41484216 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03531 30 393 PP2C-type Phosphatase Gene Family AT5G06750 35.809 9.37e-62 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03531 K01102 - gmx:100806476 220.705