Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03527 ATGGCTTCGTTTCTAAATAATCTTTTCGGGTCCCCTTACGAAAAGTATAATATCAAAGCTGAACCTAAAGACCCTCTGGTGTGGTCGAGGCCACTGGTTAGGAATCACTGTGGCGAATTCTCCATGGCTGCGGTTCAGGCGAATATGAATATGGAAGATCAGGGTCAAGTTGAAGTTGGCACTGATGCACTCTTTGTTGGAGTTTATGATGGCCATAAAGGCGACACTGCTTCCATCTATCTTAGAGATCATATCTTCACTGAACTATTAAGGCTTATTCAGCAGAATAATAACAGTATGAATGAGGATATTCTGAGACAAGTTGTTGACCAAATGGAGACAGGTTTTATTGACTTTGCTAGATATAGATGTCAGCAACATCATGAGGTACAGAGTAGTTTTGTTAGTTCAGGTTGTTTGATTTGTATCATATGGAGAGGGACGTTATTTGTCGCCAACGTTGGAAACTCGCGTGCTATACTCGTTTCTCAGAAGGGCATTGGTCAATTTAAAAGATTGGTTGTTAAACAGATGGTTAGAGATCACAATTTTCTAAATCCAGATATTCAGCAAGAACTCACTGAATTGCATCCAGATCATAATAATCGTAGTTGCTACCAAAGTATTGAAGTTAAAGGCTTAATCGAGACAAGTAGATGTATAGGATATGCATATATGAAAAACTCAGAGTTCACCAAAAGGAGATCATTCGAAATCCCATTGTCTGAAGTAGTGATTCCAACATTTACAAGACCTTTGCTATCATCACTGCCAGATGTTTATTCAAGAGACTTAAAAAACACTGATAGGTTCATTATATTTGGATCTGGTGGATTTTGGAAATTGATTTCAAATGAGAAGGCTGCTAGAGTTGTTAGCACCAGTCCACGAGATAGAATAGCGGAAACACTTGCCAAGCTTGCTCTAGAGAAGGGAGCTGCTAAAAGGGGGAAAAAATATCGTGACCTTGTAGAGATTCCTAAGAGTAATTGTGTTAGTGGGAACAATGGCAATCGAAATTCTGGATTTAGATCGGCTTATCATGATGATATAACTGTGATTGTTGTATATTTGGACCAAAGGCCAAATAGGGAGGGTGTGATGCCAGAGATCAACTCCTATATAGGCTGCAATAACACAGTTCAACAATCAGAGTTTACAAATTTCTATAATAATGCTAATGTGTAA 1188 0.3855 MASFLNNLFGSPYEKYNIKAEPKDPLVWSRPLVRNHCGEFSMAAVQANMNMEDQGQVEVGTDALFVGVYDGHKGDTASIYLRDHIFTELLRLIQQNNNSMNEDILRQVVDQMETGFIDFARYRCQQHHEVQSSFVSSGCLICIIWRGTLFVANVGNSRAILVSQKGIGQFKRLVVKQMVRDHNFLNPDIQQELTELHPDHNNRSCYQSIEVKGLIETSRCIGYAYMKNSEFTKRRSFEIPLSEVVIPTFTRPLLSSLPDVYSRDLKNTDRFIIFGSGGFWKLISNEKAARVVSTSPRDRIAETLAKLALEKGAAKRGKKYRDLVEIPKSNCVSGNNGNRNSGFRSAYHDDITVIVVYLDQRPNREGVMPEINSYIGCNNTVQQSEFTNFYNNANV 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03527 395 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 19 361 - -
Tsu07g03527 395 ProSiteProfiles PPM-type phosphatase domain profile. 36 358 IPR001932 -
Tsu07g03527 395 Gene3D - 20 365 IPR036457 -
Tsu07g03527 395 Pfam Protein phosphatase 2C 63 315 IPR001932 -
Tsu07g03527 395 PANTHER ALPHABET, ISOFORM E-RELATED 19 361 - -
Tsu07g03527 395 SMART PP2C_4 33 356 IPR001932 -
Tsu07g03527 395 CDD PP2Cc 40 358 IPR001932 -
Tsu07g03527 395 SUPERFAMILY PP2C-like 29 360 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03527 Tsu-Chr7 41470566 41472050 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03527 26 391 PP2C-type Phosphatase Gene Family AT5G06750 38.172 3.89e-78 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03527 K01102 - gmx:100778238 251.136