Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03524 ATGTCACTTCTCTCCTATTTCCTTCCCCTCCTTTTCCTTCTCCTCAATTTCCCCTCCTTTTCCATCTCCGCCACATGTCCTCTCAACATAACCATCCTCCGCCACATCGGCGACGGAACACTCCGTCCAATCGATTCAGGAAAACAGTGTCATTACATCACACAAGCAATCAATCTTGTCCAATCAGATTACCTTCACCGCACCGGTTTCTTCGTTCCACCTCTCAACACAGCCGAATCATGCTGGAAATCATTCCAATCATTCATCGACGAATTTCAACCTAATTTCGATATTCGTCGTTCTTGCGGTTTTCAAACTTCATGGATCTCACAAGGTTGTATGAACATCACAACAAAATCACAATTCGAAAATCAAGTTTCATTACCTCAACTTCAATCTCTTCAATTAAACTGTAACGTTTCACTTGATAATAACGCTCCTTGTGCTCTTTGTACGTCAAAACGTTCAGAAGCACTTTCATCTCTCACCGGAGCAACTCCCGGTACCATCGCCGATTGTAGATCTTATACCGCGATTTACTCCGCTTCACTTTCCGTTGAATTTGGTCCAACTAACACCGGTACTGCTAAGTGTTTGTTCGGTCTCGATTTCACTTCGGATTCTTCGGGTTCTAATAGTTTGAATTCCGGTTTGGATTCTATGAATCAAAGTACTACTTTGATTAGGTTTAGTTTTGATGAGATTAAGAAAGCAACTAGGAATTTTTCTAGAGATAATATAATTGGAAGTGGTGGTTATGGAAATGTTTATAAAGGTTTATTATCTGATGGAACAGAAGTTGCATTGAAAAGGTTTAAGAATTGTTCTGTTGCCGGTGATGAAAGTTTTACTCATGAAGTTCAAGTTATTGCTAGTGTTAGACATGTTAATCTTGTTGCTTTAAGAGGTTATTGTACTGCTACTACTAATTTAGAAGGTCATCAGAGGATTATTGTTACTGATTTGATGGAGAATGGGAGTCTTTATGATCATTTATTTGGTTCGTCGAAGAAGAAATTGAGTTGGCCGGTTCGTCAGAAGATTGCTCTTGGTACGGCTAGGGGTTTAGCTTATTTGCATTACGGTGCTCAACCGTCGATTATTCATAGGGATATTAAAGCGAGTAATATACTTTTGGATGAGAAGTTTGAAGCTAAGGTAGCGGATTTTGGATTGGCGAAGTTTAATCCGGAGGGAATGACTCATATGAGTACTAGGGTAGCTGGAACTATGGGGTATGTTGCTCCTGAGTATGCTTTGTATGGACAGTTGACAGAGAGGAGTGATGTGTTTAGTTTCGGTGTTTTGCTTCTCGAGCTTTTGAGCGGAAGAAAGGCACTTGAAACAAATGAGGATGGTCAACCTACTGCTTTTAGTGACTTGGCTTGGTCATTGGTTAGAAATAATAGGGCTTTGGATGTTGTTGAAGATGGTATGCCAGAACCTGGTACACCGGAAATTCTCGAGAAATATGTGTTGGTTGCTGTTTTATGTTCTCATCCGCAGCTATATGCGAGGCCAACAATGGATCAGGTTGTTAAAATGCTAGAAACAGATGATGAAGCAGTGCCCTCGGTCGAAAGGCCAATCCCTTTTATTGCAGGGAGGCTTGATATCGAGAAATCTGCAAGCAATAACTCGGGTCAGCTCTGCAGTCCAACTGGTTATCAAGCATATACAATGCAATTACAAAGTCGTCGCACTTCTACGTGTAATGAAGAGGAAGGAAACTCAAAACGTCCTTCTAATTGTAAGGAAGACGAAGGAAACTCAAAAAGTCCTTCTAATTGTAAGGAAAAGGAAGGAAACTCGGAATGCGGGTCCGTAAGCAAAGATTGA 1839 0.4089 MSLLSYFLPLLFLLLNFPSFSISATCPLNITILRHIGDGTLRPIDSGKQCHYITQAINLVQSDYLHRTGFFVPPLNTAESCWKSFQSFIDEFQPNFDIRRSCGFQTSWISQGCMNITTKSQFENQVSLPQLQSLQLNCNVSLDNNAPCALCTSKRSEALSSLTGATPGTIADCRSYTAIYSASLSVEFGPTNTGTAKCLFGLDFTSDSSGSNSLNSGLDSMNQSTTLIRFSFDEIKKATRNFSRDNIIGSGGYGNVYKGLLSDGTEVALKRFKNCSVAGDESFTHEVQVIASVRHVNLVALRGYCTATTNLEGHQRIIVTDLMENGSLYDHLFGSSKKKLSWPVRQKIALGTARGLAYLHYGAQPSIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVLLLELLSGRKALETNEDGQPTAFSDLAWSLVRNNRALDVVEDGMPEPGTPEILEKYVLVAVLCSHPQLYARPTMDQVVKMLETDDEAVPSVERPIPFIAGRLDIEKSASNNSGQLCSPTGYQAYTMQLQSRRTSTCNEEEGNSKRPSNCKEDEGNSKSPSNCKEKEGNSECGSVSKD 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03524 612 Pfam Protein tyrosine and serine/threonine kinase 245 516 IPR001245 GO:0004672|GO:0006468
Tsu07g03524 612 PANTHER OS01G0253100 PROTEIN 18 213 IPR045271 GO:0004714|GO:0006468
Tsu07g03524 612 MobiDBLite consensus disorder prediction 572 612 - -
Tsu07g03524 612 Gene3D Phosphorylase Kinase; domain 1 206 321 - -
Tsu07g03524 612 Pfam SPARK 23 165 IPR043891 -
Tsu07g03524 612 SUPERFAMILY Protein kinase-like (PK-like) 216 517 IPR011009 -
Tsu07g03524 612 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 18 213 - -
Tsu07g03524 612 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 212 569 - -
Tsu07g03524 612 SMART serkin_6 242 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03524 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 367 379 IPR008271 GO:0004672|GO:0006468
Tsu07g03524 612 ProSiteProfiles Protein kinase domain profile. 242 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03524 612 MobiDBLite consensus disorder prediction 567 612 - -
Tsu07g03524 612 PANTHER OS01G0253100 PROTEIN 212 569 IPR045271 GO:0004714|GO:0006468
Tsu07g03524 612 ProSitePatterns Protein kinases ATP-binding region signature. 248 270 IPR017441 GO:0005524
Tsu07g03524 612 Gene3D Transferase(Phosphotransferase) domain 1 323 527 - -
Tsu07g03524 612 CDD STKc_IRAK 248 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03524 Tsu-Chr7 41456131 41458113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03524 13 561 Receptor kinase-like Gene Family AT2G48010 59.333 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Tsu07g03524 PK_Tyr_Ser-Thr 2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03524 - - gmx:100786298 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03524 07 41456131 41458113 Tsu07g03524 07 41456131 41458113 ECH
Tsu07g03524 07 41456131 41458113 Tsu01g03862 01 46415035 46417131 ECH
Tsu07g03524 07 41456131 41458113 Tsu01g03862 01 46415035 46417131 PCT