Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03488 ATGAGGATCCGTAAAAGACAGgctattttctcttcttctgAGTCAATTTCTTCTTTGCATCTCTCAGATCCACACCAGTTTAACCGGTCACCGGTTATGGTGCAACTCGGTGATGAAGCTACTCAACTTCATCTTTCAGCTGGTTCTAGTTTGGATCGTTATCAACCGTCTGATCAAACACTCCCACTGATTGGGAAACTAAACAACGGCCATGGTTTTCTCTCCAGTATGGAGGAAAGTCAGGTACACAAACACCACAACAAGCAAGAACAAGGACAAGGACAGgaacaacaacaagaacaagatCCTTTGgATGATGATAAAGTTAGAGAGCAAGGCAAAGAGAGTGGAAACTTTGGAGATAACAAAAGTAATCATATCAGCAAAGGAGACATCTTGGTTTGTTCTCAAGTTTTGCCATCATCATCAAGTACTTTTGCTCAAGATGGGAGATGGTGTGAGGGAGAGAAAGCTATTCCTTTGAAGAAAAGGAAAGGAAGGTTAGAGAATGTTGGGATGGAGAGTAATGATAGTGGTAAGAAAATGAAGACTAAGATGAAGACGAAGATGAATAAGAATTGTTCTGTGgaaaaagatgatgaagatgaagaaagtgaaacgAAAGTGAATACTATTAAGAAGCGGGCGACTAAAAGGGGAAGTGCATTGATGGAAGGTTCGAGGTGCAGTCGTGTTAACGGAAGAGGATGGCGATGTTGTCAACAAACACTTGTTGGTTATTCTCTTTGTGAGCATCATTTAGGGAAAGGAAGGTTGAGAAGCATGACTAGTGTTAGAAGTAGATCTAATATTGGATTTTCTACTAATGTTGCACCAAATAATGTTGTTGATCTTGATCATAGTGCTTCTAATTCTAATGATcttgaaaagaaaatcattatTGTCGATGATGAGTTGGACAACGATGACGAGAAGAAGCCAGTGGTGATGATTGCAAAGAAGAGAATGAAGCTTGGAATGGTTAAAGCTCGATCCATGAGCAGCTTATTGGGACAAACAGACAACAAGGTTGCTTTAGTTGATGAGAATAACAAGTAA 1059 0.3683 MRIRKRQAIFSSSESISSLHLSDPHQFNRSPVMVQLGDEATQLHLSAGSSLDRYQPSDQTLPLIGKLNNGHGFLSSMEESQVHKHHNKQEQGQGQEQQQEQDPLDDDKVREQGKESGNFGDNKSNHISKGDILVCSQVLPSSSSTFAQDGRWCEGEKAIPLKKRKGRLENVGMESNDSGKKMKTKMKTKMNKNCSVEKDDEDEESETKVNTIKKRATKRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSNIGFSTNVAPNNVVDLDHSASNSNDLEKKIIIVDDELDNDDEKKPVVMIAKKRMKLGMVKARSMSSLLGQTDNKVALVDENNK 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03488 352 MobiDBLite consensus disorder prediction 8 23 - -
Tsu07g03488 352 ProSiteProfiles WRC domain profile. 223 267 IPR014977 -
Tsu07g03488 352 MobiDBLite consensus disorder prediction 78 127 - -
Tsu07g03488 352 Pfam WRC 225 265 IPR014977 -
Tsu07g03488 352 PANTHER - 19 349 IPR031137 GO:0005634|GO:0006351|GO:0032502
Tsu07g03488 352 MobiDBLite consensus disorder prediction 171 198 - -
Tsu07g03488 352 MobiDBLite consensus disorder prediction 171 208 - -
Tsu07g03488 352 MobiDBLite consensus disorder prediction 1 23 - -
Tsu07g03488 352 PANTHER OS02G0773600 PROTEIN 19 349 - -
Tsu07g03488 352 MobiDBLite consensus disorder prediction 101 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03488 Tsu-Chr7 41099970 41102224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03488 216 271 GRF Transcription Factor Family AT2G36400 36.207 5.60e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03488 - - mtr:MTR_7g093360 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03488 07 41099970 41102224 Tsu07g03488 07 41099970 41102224 ECH
Tsu07g03488 07 41099970 41102224 Tsu01g01975 01 20094736 20096941 PCT