Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03485 ATGGAACCCATACAATCTCTCAACGGCGATTTCGGCTTCACCGGAAACGATCGAAGATTCGCTTTTTCACGTCAAGCTTCTTTCCAACAACCCCGCACACCAATTTCAACTGATTCAACCGATTTAGGTCTCAGAAAACCCTTTCTCTCAAGAACTGATTCCAGCATAGATATTCCTCCTTCTGGACCCCATCATCATTATTGGTCTGGTCATGATGATAAACCTTCTGGGCCATTGCAAAGATCGAATTTTTCgtattttgttttgtctgtTTTTCGAAATATTAGGTCTGGTCATAGGTATATGAAGAGgttgttttttatgatttcgCTTAATGTTGCTTATTCTACTGTTGAATTGCTCGTTGGACTCTTCACTGGTCGTGTTGGTCTGGTGTCTGATGCAGTTCACTTGACATTTGGATGTGGTCTTCTCACGTTTTCGTTGTTTGTTATGGGTGCATCTAGGAACAAACCTGATGGAGATTATACTTATGGGTATAAAAGATTAGAAGTCTTGTCTGCATTTACAAATGCTGTAAGTATTCCACATTTCATTTTCTGTGCAGCTCCGGTTGAAGCACTTCATGCATTTATACAAGATGAATCAGAACACAAGCATTACTTGAATGTTTCTGCAGTGACCAATTTATTTGTGAATCTCATTGGTGTAtggttcttcaggaactatgcTCGGATAAATCTTGCTTACCGAAATGCAGAAGATATGAATTGCCATTCTGTTTTCCTGCATGTTCTTACAGATTCCATTCGCAGTGCAGGTTTGATATTGGCATCCTGGTTATTGTCCATCGGGGTTGAGAACGCAGAAGTATTGTGTCTGGGACTTGTTTCTGTTGCAGTTTTTACTCTAGTTTTGCCTCTCTTTAGGGCAACTGGTGGTATCTTGCTCCAAATGGCACCTCCCAGCATCCCAACAACTGCTTTTAGCAAATGCTTGAGACAGATTTCTGCTCGCGAAGAAATACTGGAAGTCTCCCAGGCTCGCTTTTGGGAATTGGTGCCTGGTCATGTGGTTGGGTCACTGTCAATACAgGTAAAGAAAGGGGTGGATGATCGGCCAATACTAGAATTTGTGCATCGTCTATACCATGATTTTGGTGTGCAAGACCTCACGGTGCAGATTGATCATGCATGA 1158 0.4007 MEPIQSLNGDFGFTGNDRRFAFSRQASFQQPRTPISTDSTDLGLRKPFLSRTDSSIDIPPSGPHHHYWSGHDDKPSGPLQRSNFSYFVLSVFRNIRSGHRYMKRLFFMISLNVAYSTVELLVGLFTGRVGLVSDAVHLTFGCGLLTFSLFVMGASRNKPDGDYTYGYKRLEVLSAFTNAVSIPHFIFCAAPVEALHAFIQDESEHKHYLNVSAVTNLFVNLIGVWFFRNYARINLAYRNAEDMNCHSVFLHVLTDSIRSAGLILASWLLSIGVENAEVLCLGLVSVAVFTLVLPLFRATGGILLQMAPPSIPTTAFSKCLRQISAREEILEVSQARFWELVPGHVVGSLSIQVKKGVDDRPILEFVHRLYHDFGVQDLTVQIDHA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03485 385 PANTHER METAL TOLERANCE PROTEIN C2 5 384 - -
Tsu07g03485 385 SUPERFAMILY Cation efflux protein transmembrane domain-like 99 305 IPR027469 -
Tsu07g03485 385 PANTHER - 5 384 IPR045316 GO:0005385|GO:0006829|GO:0006882
Tsu07g03485 385 TIGRFAM CDF: cation diffusion facilitator family transporter 102 384 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Tsu07g03485 385 Pfam Cation efflux family 105 304 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Tsu07g03485 385 Gene3D Cation efflux protein transmembrane domain 101 303 IPR027469 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03485 102 384 Inorganic Solute Cotransporters AT3G61940 19.094 3.29e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03485 K14692 - gmx:100809496 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03485 07 41080172 41086787 Tsu07g03485 07 41080172 41086787 ECH