Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03474 ATGGATGAGGATATTCTGAGGGAAGTTGTTAACCAAATGGAGACAGGTTTTATTGACTTTGCTAGCTATAGATGTCAGCAATATCATGAGGTACAGAATAGTTTTGTTAGTTCAGGTTGTTTGATTTGTATGATATGGAGAGGGACGTTATTTGTCGCCAACGTTGGAAACTCGCGTGCTATACTCGGTTCTCTGAAGGGCATTGGTCCATTTAAAAGTTTGGTTGTTAAACAGTTGGTTAGAGATcacaattttcaaaatcaagATATTCAGCAAGAACTCACTGGATTGCATCCAGATCATAATAATCGTAGTTGCTACCAAAGTATTGAAGTTAAAGGCTTAATCGATACAAGTAGATGTATAGGATATGCATATATGAAAAACTCAGAGTTCACCAAAAGGAGATCATTCGAAATCCCAGTGTCTGAAGTAGTGATTCCACCTTTTACAAGACCTTTGCTATCATCACAGCCAGATGTTTATTCAAGAGACTTAAAAAACAGtgatagattcattatatttggATCTGGTGGATTTTGGAAATTGATTTCAAATGAAAAGGCTGCTAGAATTGTTAACACCAGTCCACGAGATGGAATCGCGGAAACACTTGCCAAGCTTGCTCAAGAGGAGGGGGCTTCTAATAGGGGGAGAAAGTATCGTGACCTTATAGACATTCCTACTAGTAATTGTGTTAGTGGGAACAATGGCAATCGAAATACTGGATTTAGATCGGCTTATCATGATGATATAACTGTGATTGTTGTATATTTGGACAAAATGCCAAATGGGGAGGGTGTGAGGCCAGAGATCAACTCCTATAGAGGCTATGATAACACAGTTCGACAATCAGAGTTTAGAAATTTCAATAATAATGCTAATGCGTGA 891 0.3681 MDEDILREVVNQMETGFIDFASYRCQQYHEVQNSFVSSGCLICMIWRGTLFVANVGNSRAILGSLKGIGPFKSLVVKQLVRDHNFQNQDIQQELTGLHPDHNNRSCYQSIEVKGLIDTSRCIGYAYMKNSEFTKRRSFEIPVSEVVIPPFTRPLLSSQPDVYSRDLKNSDRFIIFGSGGFWKLISNEKAARIVNTSPRDGIAETLAKLAQEEGASNRGRKYRDLIDIPTSNCVSGNNGNRNTGFRSAYHDDITVIVVYLDKMPNGEGVRPEINSYRGYDNTVRQSEFRNFNNNANA 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03474 296 SMART PP2C_4 10 257 IPR001932 -
Tsu07g03474 296 SUPERFAMILY PP2C-like 30 262 IPR036457 -
Tsu07g03474 296 PANTHER ALPHABET, ISOFORM E-RELATED 1 261 - -
Tsu07g03474 296 Pfam Protein phosphatase 2C 12 216 IPR001932 -
Tsu07g03474 296 ProSiteProfiles PPM-type phosphatase domain profile. 1 259 IPR001932 -
Tsu07g03474 296 CDD PP2Cc 7 259 IPR001932 -
Tsu07g03474 296 Gene3D - 1 264 IPR036457 -
Tsu07g03474 296 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 1 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03474 Tsu-Chr7 40982739 40983629 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03474 1 290 PP2C-type Phosphatase Gene Family AT5G06750 36.700 2.58e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03474 K01102 - zju:107432329 187.193