Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03470 ATGAATCTATTTGAACTCGCTGGATTGCATCCAGATCACAATAATCGTAGTTGCTACCAAAGTATTGAAGTTAAAGGCTTAATCGAGACAAGTAGATGTATAGGATATGCATATCTGAAAAACTCAGAGTTCACCAAAAAGAGATCATTCGAAATCCCATTGTCTGAAGTAGTGATTCCACCTTTTACAAGATCTTTGCTATCATCACAGCCAGATGTTTATTCAAGAGACTTAAAAGACAGTGATAAATTCATTATATTTGGATCTGGTGGATTTTGGAAATCGATTTCAAATGAGAAGGCTGCTAGAATAAACAGCTACAATCAAAGCTTTAAGTCAGTGTCCCCAACCGAGACCTGTTCAATCAAAGAAACAGCTACAAATAAAGCTTTAAGTCAGTGTCCAATATGTGTTGGTGTTGGACATTTTCTCAACACCAACACATGTGATTCGATTCcttcaattttctcaaatttttacCTGTGTCAACATGTCAATGCTTCATAG 507 0.3491 MNLFELAGLHPDHNNRSCYQSIEVKGLIETSRCIGYAYLKNSEFTKKRSFEIPLSEVVIPPFTRSLLSSQPDVYSRDLKDSDKFIIFGSGGFWKSISNEKAARINSYNQSFKSVSPTETCSIKETATNKALSQCPICVGVGHFLNTNTCDSIPSIFSNFYLCQHVNAS 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03470 168 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 5 125 - -
Tsu07g03470 168 PANTHER ALPHABET, ISOFORM E-RELATED 5 125 - -
Tsu07g03470 168 Gene3D - 5 134 IPR036457 -
Tsu07g03470 168 SUPERFAMILY PP2C-like 24 107 IPR036457 -
Tsu07g03470 168 Pfam Protein phosphatase 2C 23 110 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03470 Tsu-Chr7 40969821 40970327 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03470 5 104 PP2C-type Phosphatase Gene Family AT5G06750 41.748 2.64e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03470 K01102 - taes:123068676 78.5666