Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03469 ATGCCTTCGTTTCTAAGTAATCTAAGACATGTTCTTTTTGGGACCCCTTATCAACAGTATCAAATTGAAGACCCTGTGGCATTTACTAATGACCCTCTGGCGTGGTCGAGGCCACTGGCGAATATGGATATGGAAGATAAAAGCCAAGTTGAAGTTGGCACTGATGCACTCTTTGTTGGAATTTATGATGGCCATAAAGGCAACACCGTTTCCATCTATCTTAGAGAACAAATCTTCAGGGAACTAATCAGGCGCATTCAGGCGAATAATAacaatatgaataaaaatattctGAGGCAAGTTGTTACCCGAATGGATAGAGATTTTTTGGAGACTGCTggaagaaatttttttgttagttcaggttgtttgatttgtttaataTGGAGAGGGACGTTATATGCCGCCAACGTTGGAGACTCGCGCGCTGTACTCGGTTCTCTGAAGGGCATTGGTCAACTTAAAAGATTGGCTGTTAAACAGATAGTTAAAGATCACAATATTGATCGTCGAGATGTTCAAGTAGAAGTCAGGGCCTTGCAGCCAGTTCTTGCTGATATAGATTACTATATTAATTACCGTACCTTTTTATATATGGACCAAAAAGGTTTAATCAACACAACTAGATGTATAGgatataaatatttgaaggaGGAGATCAATGAAAGCGAAGTCTCAGATTGGGAAAGAGTGCCTGGACGTTTTACAAGACCTTTGCTGACATCAGAACCACATGTTTATTCAAGAAACTtaaaagactctgataaatTCATTATATTTGGATCTAGTGGATTTTGGAGAGTGATGCCAAATAAGGATGCTGCTTATGTTGTTAACACCAGTCCACGAGATGGAATCGCAGAAAGACTTGTCACACTTGCTATACAGGAAGGGGCTAAGTTGAGGAGAAGAAGATATAGTCAACTTATAGGGCTGCCTAAGAGTAATCACATTAGTGGGGAGGACATACGCTATCACAATTATCGTCAATTTAGACCGGCTTATCATGATGATATAACTGTGATTGTTGTATATTTGGACCAAAGGCCAAATAGGGAGGGTGTAATGCTAGAGATGAACTCCTATAGAGGCTGCGATGACGGATCTCAACAATCAGAGTTTACAAATTTCTATAATAATGCTAATGTGTGA 1152 0.3715 MPSFLSNLRHVLFGTPYQQYQIEDPVAFTNDPLAWSRPLANMDMEDKSQVEVGTDALFVGIYDGHKGNTVSIYLREQIFRELIRRIQANNNNMNKNILRQVVTRMDRDFLETAGRNFFVSSGCLICLIWRGTLYAANVGDSRAVLGSLKGIGQLKRLAVKQIVKDHNIDRRDVQVEVRALQPVLADIDYYINYRTFLYMDQKGLINTTRCIGYKYLKEEINESEVSDWERVPGRFTRPLLTSEPHVYSRNLKDSDKFIIFGSSGFWRVMPNKDAAYVVNTSPRDGIAERLVTLAIQEGAKLRRRRYSQLIGLPKSNHISGEDIRYHNYRQFRPAYHDDITVIVVYLDQRPNREGVMLEMNSYRGCDDGSQQSEFTNFYNNANV 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03469 383 SMART PP2C_4 23 344 IPR001932 -
Tsu07g03469 383 Pfam Protein phosphatase 2C 57 299 IPR001932 -
Tsu07g03469 383 SUPERFAMILY PP2C-like 41 348 IPR036457 -
Tsu07g03469 383 Gene3D - 30 353 IPR036457 -
Tsu07g03469 383 CDD PP2Cc 44 346 IPR001932 -
Tsu07g03469 383 ProSiteProfiles PPM-type phosphatase domain profile. 25 346 IPR001932 -
Tsu07g03469 383 PANTHER ALPHABET, ISOFORM E-RELATED 39 349 - -
Tsu07g03469 383 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 39 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03469 Tsu-Chr7 40965346 40966984 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03469 33 347 PP2C-type Phosphatase Gene Family AT5G06750 36.391 1.02e-55 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03469 K01102 - gmx:100806476 216.853