Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03465 ATGTTTCAGTGGCTTCCTAATTTACTATGTGGTTGCACAAGCAAAAACAATGTCGACATCAATGAATTTGATGAAGATCCTTTAGGGTGGTCGCGGGACCTGCTAGAACATCGATTGGGAGAATTCTCCATGGCTGCGGTTCAGGCAAATGGTATTATGGAGGGTCAGAGCCAGCTTGATGTTGGCAAGAAAGCACTCTTTGTTGGAATTTATGATGGCCATAATGGTGCCGATGCTTCCAACTTCTTGAGTAATCGCCTCTTTGAAAATCTATTACAGAAAATTCAgcagaataataataatatgtctGAAAATATTCTGAGGCAAGTTGTTGCTGAAATGGAGGAATTGTTTATGACTGATGTTGAAGAGGGTAATCAACAACAGCCAGAGCTAGCTCTAGTAGGATCAAGTTGTCTGTTTTGTATCGTATGGAGAAGGACGCTATATATCGCCAACGTTGGAAACTCCTGTGCTGTAATGGGTTATTTGGATCCATTTAATAGACTCAATGTTCGGCAGTTGGTCAAAGATCACAATGCTCGTAACAGGCATATTAAAAAAGAACTCAAGAAGTTGCATCCAAAAGATCCGACTATTGTGACGTATAATTTTGGCGCTTGGCGTGTTGGAGGCGTAAGTGAAGTAAGCAGATGTATAGGAAATGCATATTTGAAGCGGGCACCGTTCACTTTAACCTCATCCTTCCGAGTCCCACAGTCGGAACTTGCACCTTCTGATTTTACCCAACCTTTGCTATCAGCAGAACCTGCGATATCTTCAAGAGTCTTAAATGACGATGATAAATTCATTATATTTGGATCTGGTGGACTTTGGAAATTGTTGACAAATTGGCAAGCAGCTGAAATTGTTCACACCAATCCACGAGATGGAATCGCGAAAAGGATTTTGATGACTGCTCTAGAGATTGCAGCTAGAACAAATAATATAAGCTATAGTGAGCTTCGGGAGATTCCTATGGGACATGGTGTTATTAGGGGTCCTAGCGTTTCTGTTGAAGGAACTAGGCGGGCTTATCATGATGATATCTCTGTGATTGTTGTATTCTTTGACAGAAAGCCGGAACTGAATCCGACTGTGATGCCAGTGGTGACCTCGGTGCCAGGAATCGATTCCTTCAAAGGCTTCTCTGACGAGATTTATCCATCAGCTTTTAATAATCTTTATGTTGTCTCCGAAGCACATCCATACCTTGAGAGGATTGTCTGA 1230 0.413 MFQWLPNLLCGCTSKNNVDINEFDEDPLGWSRDLLEHRLGEFSMAAVQANGIMEGQSQLDVGKKALFVGIYDGHNGADASNFLSNRLFENLLQKIQQNNNNMSENILRQVVAEMEELFMTDVEEGNQQQPELALVGSSCLFCIVWRRTLYIANVGNSCAVMGYLDPFNRLNVRQLVKDHNARNRHIKKELKKLHPKDPTIVTYNFGAWRVGGVSEVSRCIGNAYLKRAPFTLTSSFRVPQSELAPSDFTQPLLSAEPAISSRVLNDDDKFIIFGSGGLWKLLTNWQAAEIVHTNPRDGIAKRILMTALEIAARTNNISYSELREIPMGHGVIRGPSVSVEGTRRAYHDDISVIVVFFDRKPELNPTVMPVVTSVPGIDSFKGFSDEIYPSAFNNLYVVSEAHPYLERIV 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03465 409 Coils Coil 85 105 - -
Tsu07g03465 409 SUPERFAMILY PP2C-like 62 359 IPR036457 -
Tsu07g03465 409 ProSiteProfiles PPM-type phosphatase domain profile. 41 357 IPR001932 -
Tsu07g03465 409 SMART PP2C_4 34 355 IPR001932 -
Tsu07g03465 409 CDD PP2Cc 61 357 IPR001932 -
Tsu07g03465 409 Pfam Protein phosphatase 2C 60 313 IPR001932 -
Tsu07g03465 409 PANTHER ALPHABET, ISOFORM E-RELATED 18 380 - -
Tsu07g03465 409 Gene3D - 29 362 IPR036457 -
Tsu07g03465 409 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 18 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03465 Tsu-Chr7 40937605 40939542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03465 28 393 PP2C-type Phosphatase Gene Family AT5G06750 42.432 1.23e-97 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03465 K01102 - pvy:116121639 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03465 07 40937605 40939542 Tsu01g01963 01 19916287 19920133 PCT