Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03461 ATGTATCAACATTGGTCAAGGATGTATGGAACACAATGGGAATCTTACATGGGAATTAACAACCTAGTTAAGGTTGTTGGATCAGAACAGGTTATGAGTTTTGAGCCAATCAAATCAACCTGCAACAACATTGTGACTAGTAGTAGTAATCTTGAAACACCTTATGAAGGTATTGGTGCAGTAACTGTAGCTAAAATCAAAAGTCCTGTTAGTTATCAAGGTGGAGGAGAATATTATGATGAGGATCAGATTGAAGTTCCTGATTGGTGTTTTGATCAGTTTCCAAAGATAACAGATCCTCCGTTGTTGAATTGTCAAGGTTCTGGAGATAACTTCACAAGCTCTTTGTACTCAGTTTCAAAAGAATCTTTGTTGTCTAATAGTGCAGATAGTCATAATTCTTCTGAAGAAGAATATAGTAATTTTCAGTCTGGAAATATGTCATTTTATGATCATTTTCCTCAAAATCATGATGAATTGATGAAGAATGATGCTTCTAGAGATGAAAAGccttttgaaatttcatttcaGAGAATTAAGTCGGGCTCACCTACAAAGTCACACAAGCAGTCTCCTCAACTTTATGGAATTGGGTGTGCCACTTCTAGCAACAATGCTTCTAGATGTAAAAGAAGGATAAGATGGACCGAGGAACTGCACGAATCGTTCATGATGATAGTTGATCACCTTGGTGGTCCAGATAAGGCAAAGCCTAAGGCTATACTAGATATGATGAAATCGAATTCACTGTCACTTTCTCATGTTAAAAGTCATTTACAGAAATGTAGATCTTCAGAACGCGTGCATAAAGCTTTGCGAGAAAGATCTGAGGAAGGACAAAGAACAGATAAAGTCACAGAACTTCAACTAAAAATCCATATGCAAATTGAGGAATCGCGACAATTGCAACTAGAGGTTCGAAAAAGTATTTCCCAACAGCTAGAGGTAATATGCATTTGCTGCTAG 966 0.3644 MYQHWSRMYGTQWESYMGINNLVKVVGSEQVMSFEPIKSTCNNIVTSSSNLETPYEGIGAVTVAKIKSPVSYQGGGEYYDEDQIEVPDWCFDQFPKITDPPLLNCQGSGDNFTSSLYSVSKESLLSNSADSHNSSEEEYSNFQSGNMSFYDHFPQNHDELMKNDASRDEKPFEISFQRIKSGSPTKSHKQSPQLYGIGCATSSNNASRCKRRIRWTEELHESFMMIVDHLGGPDKAKPKAILDMMKSNSLSLSHVKSHLQKCRSSERVHKALRERSEEGQRTDKVTELQLKIHMQIEESRQLQLEVRKSISQQLEVICICC 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03461 321 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 17 316 IPR044848 GO:0003700
Tsu07g03461 321 SUPERFAMILY Homeodomain-like 209 264 IPR009057 -
Tsu07g03461 321 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 17 316 - -
Tsu07g03461 321 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 210 264 IPR006447 GO:0003677
Tsu07g03461 321 Gene3D - 209 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03461 Tsu-Chr7 40918053 40920108 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03461 191 316 G2-like Transcription Factor Family AT4G28610 39.844 1.14e-21 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tsu07g03461 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03461 - - mtr:MTR_7g093010 486.878