Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03448 ATGGCTGCAGTTCAGGCAAATGGTGTTATCGAGGGTCAGAGCCAGCTTGATGTTGGCAAGAAAGCACTCTTTGTTGGAATTTATGATGGCCATAATGGTGCCGATGCTTCCAGCTTCTTGAGTAATCGCCTCTTAGAAAATCTATTACAGAAAATTCAGCAGAATAACAATAATATGTCTGAAAATATTATGAGGCAAGTTGTTGCTGAAATGGAGGAATTGTTTATGACTGATGTTGAAGAGGGTAATCAACAACAGCCAGAGCTAGCTCTAGTAGGATCAAGTTGTCTGTTTTGTATCGTATGGAGAAGGACGCTATATATCGCCAACGTTGGAAACTCCCGTGCTGTAATGGGTTATTTGGATCCATTTAATAGACTCAATGTTCGGCAGTTGGTCAAAGATCACAATGCTCGTAACAGGCATATTAAGAAAGAACTCAAGAAGTTGCATCCAAAAAATCCGACTGTTTTGACGTATAATTTTGGCGCATGGCGTGTTGGAGGCATAAGTGAAGTAAGCAGATGTATAGGAAATGCATATTTGAAGCGGGCACCATTCACTTTAACCCCAGCCTTCCAAGTCCCACTGTCGGAACTTGCACCTTCTGGTTTTACCCAACCATTGCTATCAGCAGAACCTGCGATATCTTCAAGAGTCTTAAACGACgatgataaatttattatatttggGTCTGGTGGACTTTGGAAATTGTTGACAAATTGGCAAGCAGCTGAAATTGTTCACACCAATCCACGAGATGGAATCGCGAAAAGGATTTTGATGACTGCTCTAGAGATTGCATCTAGAACAAATAATATAAGCTATAGTGAGCTTCGGGAGATTCCTACGGGACATGGTGTTATTAGGGGTCCTAGTGTTTCTGTTGAAGGAACTAGGCGGGCTTATCATGATGATATCTCTGTGATTGTTGTATTCTTTGACAGAAAGCCGGAACTGAATCCGACTGTGATGCCAGTGGTGACCTCGGTGCCAGGAATCGATTCCTTCAAAGGCTTCTCTGACGAGATTCATCCATCACCTTTTAATAATCTTTATGTTGTCTCTGAAGCACATCCATACCTTGAGAGGATTGTCTGA 1101 0.4142 MAAVQANGVIEGQSQLDVGKKALFVGIYDGHNGADASSFLSNRLLENLLQKIQQNNNNMSENIMRQVVAEMEELFMTDVEEGNQQQPELALVGSSCLFCIVWRRTLYIANVGNSRAVMGYLDPFNRLNVRQLVKDHNARNRHIKKELKKLHPKNPTVLTYNFGAWRVGGISEVSRCIGNAYLKRAPFTLTPAFQVPLSELAPSGFTQPLLSAEPAISSRVLNDDDKFIIFGSGGLWKLLTNWQAAEIVHTNPRDGIAKRILMTALEIASRTNNISYSELREIPTGHGVIRGPSVSVEGTRRAYHDDISVIVVFFDRKPELNPTVMPVVTSVPGIDSFKGFSDEIHPSPFNNLYVVSEAHPYLERIV 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03448 366 SUPERFAMILY PP2C-like 20 316 IPR036457 -
Tsu07g03448 366 ProSiteProfiles PPM-type phosphatase domain profile. 1 314 IPR001932 -
Tsu07g03448 366 Pfam Protein phosphatase 2C 20 271 IPR001932 -
Tsu07g03448 366 Gene3D - 1 319 IPR036457 -
Tsu07g03448 366 Coils Coil 42 62 - -
Tsu07g03448 366 CDD PP2Cc 18 314 IPR001932 -
Tsu07g03448 366 PANTHER ALPHABET, ISOFORM E-RELATED 3 337 - -
Tsu07g03448 366 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 3 337 - -
Tsu07g03448 366 SMART PP2C_4 7 312 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03448 Tsu-Chr7 40798813 40800465 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03448 1 350 PP2C-type Phosphatase Gene Family AT5G06750 41.243 3.27e-90 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03448 K01102 - sind:105162489 287.73