Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03446 ATGCCTTCGTTTCTAAGTAATCTTTTTGGGTCCCCTTACAAAAAGTATAATTTCAAAGCTGAACCGTTTAATAAAGACCCTCTGGCGTGGTCGAGACCACTGGTTATGCATCACTGTGGCGAATTCTCCATGGCTGCGGTTCAGGCGAATAAGGATATGGAAGATCAGAGCCAAGTTGAAGTTGGCACTGATGCACTCTTTGTTGGAGTTTATGATGGCCATAAAGGCGACGCCGCTTCCAACTATCTTATGGATCATATCTTCACTGAACTATTAAGGCTTATTCAGGCGAATAAAAACAATATGCATGAGAATATTCTGACGCAAGTTGTTGGCCAAATGGAGACAGAATTTATTGAGTTTGCTAGAAATTGTTTTGAGCAACAGCATCAGGTAAAGAATAGTTCTGAGATACAGCGGGTACCGAGTAGTTCTGAGATACAGCCAGTACCGAGTAGTTATGAGATACAGCAGGTATCGAGTAATTCTGAGATACAGCAGGTATCAAGTAGTTCTTCTGAGATACAGCAGCTATCAAGTAGTTCTGAGATACAGCCGGTACTGAGTAGTTCTGAGCAACAGCATGAGATACAGAATAGTTTTGTTAGTTCAGGTTGTTTGATTTGTATCATATGGAGAGGGACGTTATTTGTCGCCAACGTTGGAAACTCGCGTGCTATACTCGGTTCTCAGAAGGGCATTGGTCAATTGAAAAAATTGGGTATTAAACAGATGGTTAAAGATCACAGTTTTCTAAATCCAGATATTCAGCAAGAACTCACTGGATTGCATCCAGATCATAATAATCGTAGTTGCTACCAAAGTATTCAAGTTAAAGGCTTAATCGAGACAAGTAGATGTATAGGATATGCATATATGAAAAACTCAGAGTTCACCAAAAGGAGATCATTCGAAATCCCATTGTCTGAAGTAGTGATTCCACCTTTTACAAGACCTTTGCTATCATCACAGCCAGATGTTTATTCAAGAGACTTAAAAAACAGtgatagattcattatatttggATCTGGTGGATTTTGGAAATTGATTTCAAATGAGAAGGCTGCTAGAGTTGTTAACACCAGTCCACGAGATGGAATCGCGGAAACACTTGCCAAGCTTGCTCAAGAGGAGGGGGCTGTTAATAGGGGGAAAAAATATCGTGACCTTATAAAGATTCCTAAGAGTAATTGTGTTAGTGGGAACAATGGCAATCAATATTCTGGATTTAGATCGGCTTATCATGATGATATAACTGTGATTGTTGTATATTTGGACCAAAGGCCAAATAGGGAGGGTGTGATTCCAGAGATGAACTCCTATAGAGGCTATGATAACACAGTTCAACAATCAGAGTTTATAAATTTCTATAATAAAGCTAATGCGTGA 1389 0.3895 MPSFLSNLFGSPYKKYNFKAEPFNKDPLAWSRPLVMHHCGEFSMAAVQANKDMEDQSQVEVGTDALFVGVYDGHKGDAASNYLMDHIFTELLRLIQANKNNMHENILTQVVGQMETEFIEFARNCFEQQHQVKNSSEIQRVPSSSEIQPVPSSYEIQQVSSNSEIQQVSSSSSEIQQLSSSSEIQPVLSSSEQQHEIQNSFVSSGCLICIIWRGTLFVANVGNSRAILGSQKGIGQLKKLGIKQMVKDHSFLNPDIQQELTGLHPDHNNRSCYQSIQVKGLIETSRCIGYAYMKNSEFTKRRSFEIPLSEVVIPPFTRPLLSSQPDVYSRDLKNSDRFIIFGSGGFWKLISNEKAARVVNTSPRDGIAETLAKLAQEEGAVNRGKKYRDLIKIPKSNCVSGNNGNQYSGFRSAYHDDITVIVVYLDQRPNREGVIPEMNSYRGYDNTVQQSEFINFYNKANA 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03446 462 SMART PP2C_4 27 423 IPR001932 -
Tsu07g03446 462 Pfam Protein phosphatase 2C 186 382 IPR001932 -
Tsu07g03446 462 CDD PP2Cc 42 425 IPR001932 -
Tsu07g03446 462 PANTHER ALPHABET, ISOFORM E-RELATED 200 442 - -
Tsu07g03446 462 PANTHER ALPHABET, ISOFORM E-RELATED 21 132 - -
Tsu07g03446 462 SUPERFAMILY PP2C-like 30 427 IPR036457 -
Tsu07g03446 462 ProSiteProfiles PPM-type phosphatase domain profile. 38 425 IPR001932 -
Tsu07g03446 462 Gene3D - 31 432 IPR036457 -
Tsu07g03446 462 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 200 442 - -
Tsu07g03446 462 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 21 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03446 Tsu-Chr7 40787400 40789192 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03446 202 458 PP2C-type Phosphatase Gene Family AT5G06750 37.643 1.67e-48 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03446 K01102 - dct:110092686 200.29