Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03440 ATGATTCGCAACTTCCTTTACGTGGTTCTCAATCTCGTTGTCTTCTCGTCAATTTTCATTTCTCATAGCTTCGCCGCGTTAACTCATCCACCCGAAGTTTGGGCTCTACAAGATCTATACAGGTCCTTGAACTACTCAGAGGCGCTTGGAGGATGGAATGGTAGTGATCCTTGTGAGGAGTCTTGGACAGGTGTTGCTTGTTCTGGGTCATCGGTTATTCAACTAAAAATTCAAGGGTTAAACCTCACTGGGAGTCTGTGCAGGCTTTATAATCTACGAAATTTGAAGCAGCTtgatgTCAGTTCTAATAACATAGTGGGCGAAATACCATTTGGTTTACCCCCCAATGTCACTCATATGAATTTAAGCCACAATTTCTTGATTGGACCCATTGGTGACATATTTACTGGCTTAGATAATCTCAAAGAAATGGACCTTTCATACAATAATTTGTCCGGAGATCTACCAAGATCATTTGGTTCCTTGACAAACCTTGCTAGATTGTTCTTGCAGAATAACAGATTCACTGGATCAGTCACCTACCTGGCCGAACTTCCACTTACAGATTTGAACATTCAAGATAATCTGTTCAGTGGCCTTCTTCCACATCACTTTCagtacataaaaaatttatgGTTTGGTGGGAATAAATTCCATGCAGCGGACAACTCTCCTCCATGGACTTCGCCTTTTGAGACATTAACAGTTGAGCATAATATTAGTCGCCCACCCACAACTAATACAAATGCCATCAAGAACTATGCTCCTCCCAAAGTTGAGCATAATATTAGTGAGCACAAGCATAAGAAGAAACAATTAGGTCCTGGAGCAATTGCTTTTATGGTTGGTGGAGGAACACTAATGGCTACAGGTATCGCACTACTTGTTGCAATCCATTTGAATAAACTGCGTGCTCAAAGCCAGAACTTGATTCACTCCGAAAGCAATGACATCTCTTTGCATTCTCATCCAACCAGTGCAAGCATAGTGGTCTCTTCTTCCGAACTAGACGACGTGCCACTACTCCCACCCGCCGACGTTGCATCTCTTTTGGGTCCAACGAGATTTCCTTACCCGCACCATAACAACGTGGAGGAAGCATCAAGAAGAAGTTTTTCCAAAAGAGGCAGATCCACTGGAAGGACAAAAATCTATACCATAGGGGAGCTTCAGCTGGCTACTAACTACTTCAATGAAGGCAACCTTCTGGGAGAGGGATCTCTTGGTCCTGTTTACAAAGCTAAATTTCCTAATGGCAAAaTTTTGGCTGTAAAGATCATAAACATGGCAGGTTTGTCTTACAGAGAAGAGGAAAAGTTCTTGGATGTCATTTGCACGGTTTCCAAATTGAAGCACCCCAACATCATACAACTCAATGGTTACTGTTTAGAGCACGGAGAGCATCTTCTTGTTTATGATTACTTTGGAAATATAACTCTAAACGATGCTCTTCATGGTGGAGCATGTGAACCACTATCATGGGTCCAACGTCTTCAGATTGCTCTAGCTGTTGCTCAGGCTCTGGACTATTTGCACTCGGCATGCTGCCCTCCTGTGGCCCATGGTAACTTGAAGGCGGCCAATGTTCTACTGGATGAAAATTTGATGCCTCATATTTGTGACAGTAGCTTGGCTATTTTGAGACCACTGGTGAAGAGCAATCAAGTTAGAATTCCAGCTACTGAGACTACAACAGAGAGAGACTATATTCCACCTGACCATGGCCAGCCAGGATTCAGCAGAAGGAGAGATGTCTTTGCCTTTGGGGTATTGCTTCTGGAATTGTTAACAGGAAGGAAACCTTTTGACGGTGCCAGACCAAGGGAGGAGCAATATCTGGTGAAATGGGCTTCCCCAAGGCTTTGTGATAGCGCGAGTTTGGAAAAGATAGTGGATCCCAGTATGGAAATAACATTTTCATCCAAGGTTCTTTCTCTTTATGCTGATATCATCTACCTCTGTATACAGCCTTCCAAACAACACCGTCCCCCAATGTCTGAAGTTGTGAGCTCTCTTATATCTTTTTCCCAGAAGTTCAACTTTGCAAAGAGCGGTGTAGCAGATGCTACTGAACTTTTGGAGAAGTCTTTCCGTTCAGCCAACACAGGCTTCATAATATCGGCAAACAAACGCAACGCTGCGAAGTGTGGAGGCAGCTCAGAATTTGTAGTAACCCAACCTATCtttgtttctcttcttctcaATTTCAGAGATAAAAATGGATCCCGCAGAACGTAG 2238 0.4267 MIRNFLYVVLNLVVFSSIFISHSFAALTHPPEVWALQDLYRSLNYSEALGGWNGSDPCEESWTGVACSGSSVIQLKIQGLNLTGSLCRLYNLRNLKQLDVSSNNIVGEIPFGLPPNVTHMNLSHNFLIGPIGDIFTGLDNLKEMDLSYNNLSGDLPRSFGSLTNLARLFLQNNRFTGSVTYLAELPLTDLNIQDNLFSGLLPHHFQYIKNLWFGGNKFHAADNSPPWTSPFETLTVEHNISRPPTTNTNAIKNYAPPKVEHNISEHKHKKKQLGPGAIAFMVGGGTLMATGIALLVAIHLNKLRAQSQNLIHSESNDISLHSHPTSASIVVSSSELDDVPLLPPADVASLLGPTRFPYPHHNNVEEASRRSFSKRGRSTGRTKIYTIGELQLATNYFNEGNLLGEGSLGPVYKAKFPNGKILAVKIINMAGLSYREEEKFLDVICTVSKLKHPNIIQLNGYCLEHGEHLLVYDYFGNITLNDALHGGACEPLSWVQRLQIALAVAQALDYLHSACCPPVAHGNLKAANVLLDENLMPHICDSSLAILRPLVKSNQVRIPATETTTERDYIPPDHGQPGFSRRRDVFAFGVLLLELLTGRKPFDGARPREEQYLVKWASPRLCDSASLEKIVDPSMEITFSSKVLSLYADIIYLCIQPSKQHRPPMSEVVSSLISFSQKFNFAKSGVADATELLEKSFRSANTGFIISANKRNAAKCGGSSEFVVTQPIFVSLLLNFRDKNGSRRT 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03440 745 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 2 695 - -
Tsu07g03440 745 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Tsu07g03440 745 PANTHER OS01G0253100 PROTEIN 2 695 IPR045271 GO:0004714|GO:0006468
Tsu07g03440 745 Pfam Protein kinase domain 398 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03440 745 Gene3D Transferase(Phosphotransferase) domain 1 476 696 - -
Tsu07g03440 745 Gene3D Ribonuclease Inhibitor 27 262 IPR032675 -
Tsu07g03440 745 SUPERFAMILY L domain-like 48 218 - -
Tsu07g03440 745 SUPERFAMILY Protein kinase-like (PK-like) 376 672 IPR011009 -
Tsu07g03440 745 ProSiteProfiles Protein kinase domain profile. 397 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03440 745 Gene3D Phosphorylase Kinase; domain 1 360 474 - -
Tsu07g03440 745 Pfam Leucine rich repeat 115 175 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03440 Tsu-Chr7 40745144 40752558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03440 28 707 Strubbelig Receptor Gene Family AT5G06820 50.000 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Tsu07g03440 Pkinase 1.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03440 - - gmx:100775254 957.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03440 07 40745144 40752558 Tsu07g03440 07 40745144 40752558 ECH
Tsu07g03440 07 40745144 40752558 Tsu01g01938 01 19596679 19602070 PCT