Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03438 ATGGCAGGGACTGCTATCTACACCTCCTGCAACTTAGGGAGATGTAGGTTGGTATTAAAAACTCACAATGGAAGGAGCATGCAGCCAGAGAAGCTAGTATCTCAATGTCAaatgagaagaagaaactttACAATAAAAGCAGAAGTGAGGTTTGTAACAGCTGATGATGCTAAAGAACTTGTAGCAGTAGATGGATATAATGTTCTTGATGTGAGAGACAAATCTCAGTTTGAACGTGCACACATTAAAACATGTTATCATGTCCCTCTTTTTGTTGAAAATACTGACAATGATCCTGGTACAATCTTATTAAGGACTGTACACAATAATTTTTCTGGGTTGTTCTTTGGGATACCATTCACTAGGCCAAATCCTGATTTTGTACAATCTGTCAAGAGTCAGTTACAGCCTGAAACTAAACTTTTGATTGTATGTCAGGAAGGATTAAGGTCGACCGCAGCAGCAAATAAGTTAGAGAAAGCTGGTTTCCAAAATGTAGCATGCATAACATCTGGACTTCAAACTGTGAAACCAGGAACATTTGAATCTGTTGGTTCCACGGAGTTGCAAAATGCTGGCAAAGCTGGTTTGGTGCAAATCCAAGGAAAAATTTCAGCTGTTTTAGGAACCGTTCTtatttGTGCATATTTATTCATTACCTTCTTTCCTGATCAAGCTGAGAAGCTGTTCCAATTGGTCCCTGCAGGCTGA 711 0.3854 MAGTAIYTSCNLGRCRLVLKTHNGRSMQPEKLVSQCQMRRRNFTIKAEVRFVTADDAKELVAVDGYNVLDVRDKSQFERAHIKTCYHVPLFVENTDNDPGTILLRTVHNNFSGLFFGIPFTRPNPDFVQSVKSQLQPETKLLIVCQEGLRSTAAANKLEKAGFQNVACITSGLQTVKPGTFESVGSTELQNAGKAGLVQIQGKISAVLGTVLICAYLFITFFPDQAEKLFQLVPAG 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03438 236 Gene3D - 35 182 IPR036873 -
Tsu07g03438 236 ProSiteProfiles Rhodanese domain profile. 62 185 IPR001763 -
Tsu07g03438 236 CDD RHOD 56 177 - -
Tsu07g03438 236 Pfam Rhodanese-like domain 53 174 IPR001763 -
Tsu07g03438 236 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 8 235 IPR044615 -
Tsu07g03438 236 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 46 174 IPR036873 -
Tsu07g03438 236 SMART rhod_4 52 182 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03438 Tsu-Chr7 40737635 40740293 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03438 4 230 Sulfurtransferasese or Rhodanese AT2G42220 66.079 1.48e-112 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03438 - - gmx:100500055 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03438 07 40737635 40740293 Tsu07g03438 07 40737635 40740293 ECH