Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03436 ATGGCTTCATTTCTAAATAAACTTTTTGGATCACCTTACAGAAAGTATAATATTGAATTAGATGAAACGTTTAATAATGACCCTCTGGCGTGGTCAAGGCCACTGGTTAAGCATCACTGTGGCGAATTCTCCATGGCTGCGGTTCAGGCGAATATGGATATGGAAGATCAGAGCCAAGTTGAAGTTGACACTGATAAACTCTTTGTTGGAGTTTATGATGGCCATAAAGGCGACACCACTGCCATCTATCTTAGAGATCATATCTTCAGTGAACTATTAACGCGTTTTCAGCAGAATATTCGCTATATAGAAGATCCGGCTGTTAACTTTGGGGTAGCGGTTGAGACTATGATGAGGCAAAGCATCCGCGAAATGGAGACAAGGTTTATTGAGTATGCTAAAAATAGTTTTGAGCAACAGAATGAGATACAGAATAGTTTTGTTAGTTCAGGTTGCTTGATTTGTATCATATGGAAAGGGACAATATGTGTCGCAAACGTTGGAAACTCGCGCGCTATACTCGGTTCTCAGAAGGGCATTGGTCCACTTAAAAGATTGGCTGTTGAACAGATGGTTATAGATCACAGTTTTCAAAATCCAGCTATTCAACAAGAATTCCTTCGATGTTATCCTGATAGACATAGTCACTACCAATGTATTCAAGAAAAAGGCTTAAGCGAGACAAGTAGCTGTATAGGATATGCATATATGAAAAATGCAAGGTTCACCCAAAGGAGACCATTCGAAATCCCGTTGTCGGAATTAGTGACTTCACCTTTTAATACATTTCCTTTGCTATCATCACATCCGAGTGTTTCTTCAAGACGCTTGAGAGACAGtgatagattcattatatttggATCTGGTGGATTTTGGAAATTGATTTCAAATGAGAAGGCTGCTGGAGTTGTTAACAACAGTTCACGAGATAGAATCGCGGAAAGACTTGTCACGCTTGCTCTAGAGGAGGATCCTGATAAAAAGGGGAGAACATATCGTGACCTTGTAAAGATTCCTAAGAGTAATTGTATTAGTGGGAACAATGGCAATCAAAATTCTGGATTTAGATCGGCTTATCATGATGATATAACTGTGATTGTTGTATATTTGGACAAAATGCCAAATGGGGAGGGTGTGAGGCCAGAGATCAACTCCTATAGAGGCTATGATAACACAGTTCGACAATCAGAGTTTAGAAATTTCAATAATAAAGCTAATGCGTGA 1224 0.3881 MASFLNKLFGSPYRKYNIELDETFNNDPLAWSRPLVKHHCGEFSMAAVQANMDMEDQSQVEVDTDKLFVGVYDGHKGDTTAIYLRDHIFSELLTRFQQNIRYIEDPAVNFGVAVETMMRQSIREMETRFIEYAKNSFEQQNEIQNSFVSSGCLICIIWKGTICVANVGNSRAILGSQKGIGPLKRLAVEQMVIDHSFQNPAIQQEFLRCYPDRHSHYQCIQEKGLSETSSCIGYAYMKNARFTQRRPFEIPLSELVTSPFNTFPLLSSHPSVSSRRLRDSDRFIIFGSGGFWKLISNEKAAGVVNNSSRDRIAERLVTLALEEDPDKKGRTYRDLVKIPKSNCISGNNGNQNSGFRSAYHDDITVIVVYLDKMPNGEGVRPEINSYRGYDNTVRQSEFRNFNNKANA 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03436 407 CDD PP2Cc 54 370 IPR001932 -
Tsu07g03436 407 SUPERFAMILY PP2C-like 29 373 IPR036457 -
Tsu07g03436 407 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 20 372 - -
Tsu07g03436 407 Pfam Protein phosphatase 2C 52 322 IPR001932 -
Tsu07g03436 407 ProSiteProfiles PPM-type phosphatase domain profile. 39 370 IPR001932 -
Tsu07g03436 407 SMART PP2C_4 36 368 IPR001932 -
Tsu07g03436 407 PANTHER ALPHABET, ISOFORM E-RELATED 20 372 - -
Tsu07g03436 407 Gene3D - 25 375 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03436 Tsu-Chr7 40732598 40734260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03436 29 401 PP2C-type Phosphatase Gene Family AT5G06750 34.817 2.00e-60 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03436 K01102 - csv:101222146 219.164