Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03432 ATGAATCTCCAAACAAAAAACTTCCTATCTCTTTTAGTTCCAATATCTGCAATTTTTACATCATTATATCTAATAAATCCAAATCCACAATTCCTAAACAACCTCAAATATTTCAGTTTCACAACTTTGTCACCATCATTTATATACTTAGGCAGAAACCATCATCATAGACCACATAAAAAACACCCTGAAACTGGAAATGATGGTTCTGTTTGTGATGATTTTCCACCAGGAATTCCACCTCCAAATACCAATACAACTTCTTATCTTTGTGTTGATCGAAAAGGGTGTTGTAATTTCACAACTGTTCAACAAGCTGTTAATGCTGTTCCAGATTATAGCTTAAAAAGAACCATAATTTGGATTAACAGTGGCATCTACTATGAGAAAGTTATGGTTCCCAAAACCAAACCCAACATTACATTTCAAGGACAAAGCTATACTTCAACAGCAATTGCATGGAATGATACAGCAAAATCTGCTAATGGCACATTTTATAGTGGCTCCGTACAAGTTTTTGCTTCCAACTTCATTGCTAAGAACATAAGTTTCATGAATTTAGCACCAATGCCATCTCCTGGAGCTGAAGGAGCACAAGCAGTAGCAATGAGGATATCAGGAGATCAAGCTGAATTTAGGGGTTGTGGATTTTTTGGAGCACAAGATACCCTTCATGATGATAAGGGTCGTCATTACTTCAAAGATTGCTATATTCAAGGATCTATTGATTTCATATTTGGCAATGCAAGGTCACTTTATGAGAATTGTCAATTAGTATCTATAGCAAATCCAGTACCAGCAGGACAAAAGAACATAAACGGTGCAATTACAGCTCATGGTAGAGTTTCAATGGATGAAAATACAGGATATGTATTTGTTAACAGTACAATTGGAGGCAATGGTAGAATATGGTTAGGTCGAGCATGGAGACCATATTCTCGTGTTATTTTTGCTTTCACAACTATGTCTGATATCATTGCCCCTGAAGGTTGGAATGATTTCAATGACCCTTCAAGAGACCAGACTATATTTTATGGAGAGTATAATTGTTCTGGGCCAGGGGCTAGTGTGAATATGAGGGCCCCTTATGTACAAAGATTGAATGATACACAAGCTTTTCAATTTCTCAACACAAGTTTTATTGATGGTGATCTATGGTTGGAAACTTAG 1170 0.3632 MNLQTKNFLSLLVPISAIFTSLYLINPNPQFLNNLKYFSFTTLSPSFIYLGRNHHHRPHKKHPETGNDGSVCDDFPPGIPPPNTNTTSYLCVDRKGCCNFTTVQQAVNAVPDYSLKRTIIWINSGIYYEKVMVPKTKPNITFQGQSYTSTAIAWNDTAKSANGTFYSGSVQVFASNFIAKNISFMNLAPMPSPGAEGAQAVAMRISGDQAEFRGCGFFGAQDTLHDDKGRHYFKDCYIQGSIDFIFGNARSLYENCQLVSIANPVPAGQKNINGAITAHGRVSMDENTGYVFVNSTIGGNGRIWLGRAWRPYSRVIFAFTTMSDIIAPEGWNDFNDPSRDQTIFYGEYNCSGPGASVNMRAPYVQRLNDTQAFQFLNTSFIDGDLWLET 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03432 389 PANTHER PECTINESTERASE 8-RELATED 13 388 - -
Tsu07g03432 389 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 13 388 - -
Tsu07g03432 389 Gene3D - 83 389 IPR012334 -
Tsu07g03432 389 SUPERFAMILY Pectin lyase-like 89 387 IPR011050 -
Tsu07g03432 389 ProSitePatterns Pectinesterase signature 2. 238 247 IPR033131 -
Tsu07g03432 389 Pfam Pectinesterase 92 384 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03432 Tsu-Chr7 40707899 40710697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03432 61 388 Carbohydrate Esterase AT1G05310 70.732 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03432 - - gmx:100806629 677.167