Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03429 atggctGCTTCAAGTGTTAAAAATCTCAACCAAACCACTACTCAATTAGAACCACTCCCAccacaacatcatcatcaacatcatcattttcatcatcaacaaaatcaacatcaacaacaacaacatcatcagaATAATCAAATTTCTTTTGGAATGATGCAATCTTCTTCATCACCCTCTGTCCCAGGAAGCTACATAAATAATAAAGATTCAGGAGCTTATGATTTAGGAGATTTGGATCAAGCACTTTTTTTGTATCTTAATGGACAAACTGACCCAACTAGTGTTCAAGAACAAAAACagaattcatcatcatcaggAATGAGACCTCCAACTCTTAACATTTTTCCTTCTCAACCTATGTACGTAGAgccatcatcatcaaattcgaagGCTAGTATGGAGTTAATTTCTTCGGAAACAAGTGGATCAAAGAGAGGATCAGAGGCGCCGTCTATGGAATTAACCAACTCAAGAAAAGAAATTGCTTCTGGCTCTCAGCAACCAAAACCTATCAAGCAACGAGAGAGAAATAATCATGGGAAGGGTCCAACTTCAAGTTCTGAACATGAAGGACCTAAAACACCGGATCCTAAGACACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCTAGAAAAAGCAGGCTTAGAAAAAAGGCATATATTCAACAACTAGAGTCAAGCAGAATCAAACTTAATCAGATGGAACAAGAGCTTCAGCGTGCTAGAAATCAAGGCATGTTCTTTGGTGGAGGTGCAATTTTGGGTGGTGAACAAGGTCTTCCTATTTCAATGAATGGAATTAGCTCAGAGGCTGCAATGTTTGATGTGGAATATGCAAGGTGGTTAGAGGAGCACCACCGTTTAGTGTGTGAATTAAGAGCTGCAATTCAAGAGCACATTCATGAAAATGATCTTAGAATGTTTGTAGACAAATTCTTAGCACAAATTGATCAAGTAATGCATCTAAAAAGCTTAGTTGCAAAATCAGACATATTTCATCTAGTTTCTGGTATGTGGGTTACCCCAGCTGAACGTTGCTTCTTGTGGATTGGTGGATTCAAACCTTCTGAACTCATTAAGattattgtGAGTCAAATTGAGCCTGTAACTGAGCAACAAATAATGGGCATATATGGATTACAACAATCTACACAACAAGGAGAAGATGCTCTCTCTCATGGACTTGAAGCTCTTAATCAATCTCTTTCAGAAACTATAACATCAGAATCATTGAACTATCCTCCAAACATGAACAATTACATGGATCAAATGTCTAGGGCAATGAACAAACTCTCCACTCTTGAAAGTTTCGTAAGAGAGGCGGATAATCTACGACACCAAACCATTCACCGCTTGAATCAGATCCTAACAACGCGTCAAGCAGCGAGGTGTTTTCTTGCCATGGCTGAGTACTTCCATCGTTTGCGAACCTTGAGTTCTTTGTGGTTGGCACGCCCTCGTCAAGAATAG 1473 0.3625 MAASSVKNLNQTTTQLEPLPPQHHHQHHHFHHQQNQHQQQQHHQNNQISFGMMQSSSSPSVPGSYINNKDSGAYDLGDLDQALFLYLNGQTDPTSVQEQKQNSSSSGMRPPTLNIFPSQPMYVEPSSSNSKASMELISSETSGSKRGSEAPSMELTNSRKEIASGSQQPKPIKQRERNNHGKGPTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYIQQLESSRIKLNQMEQELQRARNQGMFFGGGAILGGEQGLPISMNGISSEAAMFDVEYARWLEEHHRLVCELRAAIQEHIHENDLRMFVDKFLAQIDQVMHLKSLVAKSDIFHLVSGMWVTPAERCFLWIGGFKPSELIKIIVSQIEPVTEQQIMGIYGLQQSTQQGEDALSHGLEALNQSLSETITSESLNYPPNMNNYMDQMSRAMNKLSTLESFVREADNLRHQTIHRLNQILTTRQAARCFLAMAEYFHRLRTLSSLWLARPRQE 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03429 490 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 83 489 - -
Tsu07g03429 490 PANTHER TRANSCRIPTION FACTOR TGA9 83 489 - -
Tsu07g03429 490 CDD bZIP_HBP1b-like 199 251 - -
Tsu07g03429 490 MobiDBLite consensus disorder prediction 1 20 - -
Tsu07g03429 490 MobiDBLite consensus disorder prediction 93 201 - -
Tsu07g03429 490 MobiDBLite consensus disorder prediction 93 172 - -
Tsu07g03429 490 Coils Coil 218 245 - -
Tsu07g03429 490 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 202 217 IPR004827 GO:0003700|GO:0006355
Tsu07g03429 490 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 197 241 IPR004827 GO:0003700|GO:0006355
Tsu07g03429 490 SMART brlzneu 195 281 IPR004827 GO:0003700|GO:0006355
Tsu07g03429 490 Pfam Seed dormancy control 290 365 IPR025422 GO:0006351|GO:0043565
Tsu07g03429 490 ProSiteProfiles DOG1 domain profile. 272 486 IPR025422 GO:0006351|GO:0043565
Tsu07g03429 490 SUPERFAMILY Leucine zipper domain 200 243 IPR046347 GO:0003700|GO:0006355
Tsu07g03429 490 MobiDBLite consensus disorder prediction 1 44 - -
Tsu07g03429 490 Pfam bZIP transcription factor 199 235 IPR004827 GO:0003700|GO:0006355
Tsu07g03429 490 Gene3D - 198 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03429 Tsu-Chr7 40671709 40678666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03429 49 490 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 59.870 3.97e-179 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu07g03429 DOG1 4.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03429 K14431 - gmx:100815176 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03429 07 40671709 40678666 Tsu01g01932 01 19505113 19513857 PCT