Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03411 ATGGATTTGAATTCGCGTTATCAACATCAACTCCAACAAAACGAACCAAATTCAAGGTTGCTTCGTTTTCGCTCTACAACTAGTTCAGATCATATTCATACAAATTTCAAACAAGGTGGTGAAGTTTGTGGTGGTAGTGCAAGAACTAATAATGAACCTGCAGAGAGGTTAGCTTTGAGATTCAACAATTCTGGTGAAACTTCATCTAGCTTTCGACAATTCATGGATCATAAACCTTCTAATCATAGTAGTTCTAGTGCAAGTTCAAGCATGATGGTTGGTTCTTCTATGGGAATGGATCAACCTAATAGGACTACTTTCCCTGCTGGCCATTTCTCCAACAACATCATCTCCTTTGGAAATGGGTATGACACTATGAAAGGTGTTGAAAACTATGATGGGGTGAATGATAGTGATGGTGAACTTACTCTATCTATgaacatattaaaaaatcaaattggcTTCTCACCAAAAAGTCATTCTTCCTTGGGAAGGTTATCACACAACTCGAAAACGGGGAGCGACGGCATCGGGACAACTCACCGTGATGATGGAAGACAAGACGATGGCAACAATGATGCTCAATATTATGGTCATAAATTTCTTTATGATTCTAATGATCAGAATTTGCTTCAGTTCCCAGATTCTGTTCCAAGTAGCATCAGAGCTAAGAGAGGCTTTGCAACACATCCTAGAAGTGTCGCCGAAAGGGTAAGAAGAACTCGGATAAGTGAACGAATGAGAAAGTTGCAAGAGCTTGTTCCAAACATCGACAAGGTCAGATTCAACACGACAAAGTGTTATTTTCCCTTTTGGGACATTTATGTTGTGTTTGGAAAAGTTTAa 846 0.3842 MDLNSRYQHQLQQNEPNSRLLRFRSTTSSDHIHTNFKQGGEVCGGSARTNNEPAERLALRFNNSGETSSSFRQFMDHKPSNHSSSSASSSMMVGSSMGMDQPNRTTFPAGHFSNNIISFGNGYDTMKGVENYDGVNDSDGELTLSMNILKNQIGFSPKSHSSLGRLSHNSKTGSDGIGTTHRDDGRQDDGNNDAQYYGHKFLYDSNDQNLLQFPDSVPSSIRAKRGFATHPRSVAERVRRTRISERMRKLQELVPNIDKVRFNTTKCYFPFWDIYVVFGKV 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03411 281 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 210 259 - -
Tsu07g03411 281 MobiDBLite consensus disorder prediction 157 176 - -
Tsu07g03411 281 PANTHER TRANSCRIPTION FACTOR BHLH130 210 259 - -
Tsu07g03411 281 PANTHER TRANSCRIPTION FACTOR BHLH130 57 207 - -
Tsu07g03411 281 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 57 207 - -
Tsu07g03411 281 MobiDBLite consensus disorder prediction 157 191 - -
Tsu07g03411 281 MobiDBLite consensus disorder prediction 76 96 - -
Tsu07g03411 281 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 227 281 IPR011598 GO:0046983
Tsu07g03411 281 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 230 262 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03411 Tsu-Chr7 40534554 40536183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03411 104 259 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 38.421 1.80e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03411 - - mtr:MTR_7g092540 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03411 07 40534554 40536183 Tsu07g03411 07 40534554 40536183 ECH
Tsu07g03411 07 40534554 40536183 Tsu01g01921 01 19274354 19278028 PCT