Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03407 ATGGAAGATCAACCGCCACAACCACTTGACATTGTTCCGGTTCCACTTCAACCGCTACCAATATCAATTGACACCGGACATCATTTTGCGACTGCGGCTAAAGAGGATTCCAAAGATGCTTTGATCAAATGGGCTAAAAATGTAGcacaaaaattgaagtttaccaTTATAGTTAGGAGATCGGACAACGGCGGGGATAAGAGTAGGAAGCCGTATTTTGTGTTGGAGTGCGAACGAAGCGGCAAGTACGTGCCACCTAAAAAGAAGTTGAAAGCCGAATCTACGGGAACTAGGAAGTGCGGATGTCCATTCCGACTTCGTGGTTATtatgcaaaagaaacaaagttatGGCATATGACAGTGGTGAATGGCATACACAACCACGAGTTGGACACGGAGCTTGAGGGGCATCTTGTGGCGGGTCGGTTNGAAGACGGAAGAGACGCTATTGGTGAATGA 459 0.4357 MEDQPPQPLDIVPVPLQPLPISIDTGHHFATAAKEDSKDALIKWAKNVAQKLKFTIIVRRSDNGGDKSRKPYFVLECERSGKYVPPKKKLKAESTGTRKCGCPFRLRGYYAKETKLWHMTVVNGIHNHELDTELEGHLVAGRXEDGRDAIGE 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03407 152 Pfam Transcription factor AFT 87 130 IPR014842 GO:0000981|GO:0036086
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03407 Tsu-Chr7 40489895 40490353 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu07g03407 AFT 7.6e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03407 - - mtr:MTR_4g119600 119.012