Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03399 ATGCGAATTTGTTTTCTTCGCCAACATCAATTTTCAACAAGTACACTCAATCTTATTCAAAACATCTTCAAGAACAAAGAGAGAGAAACAGAAACGAGAAGAGAGAGGAGCCTTTCCAACAACACGATATACTACGACCGAATCAAACCCCTCTCTCTTCTCTGTGTACTCTCTTCGATTTTCTCGATTatattgttatttattattattcctCACTGTTCTCTCTTCGTTTTGAGGGAACAGTATTTAAAGTGTCAGGATCGTAAACCCTGCCACACCCAGGTGGTCATTGAGGCAGCTACAATGAACATGTGTTCTAAGTGTTACAAGGACACATTGTTGAAGCAGGAGCAAGACAAACTTGCAGCGACATCAGTTGAAAACATTGTGAACGGCAATTCCAGTGGCAACGGAAAGCTGGCCGTGACTACAGCTGCTGTCGATGTACAAGTCGGAACTGTGGAGGTCAATACAGCATGTCCCGAGGTTCCCGAAAATTCAATCTTTGCTGAAAGTGTGGAGGTGAAAGCCAAGACTGGTCCCAGCAGATGTACTACTTGCCGGAAACGTGTTGGATTAACTGGTTTCAGCTGCAAATGTGGCAACCTCTTTTGTTCAATGCATCGCTATTCTGATAAACATGATTGTCCTTTCGATTATAGAACTGATGGTCAGAAAGCCATAGCTGAAGCCAACCCAGTAATTAAGGCTGATAAACTTGATAAAATATAG 732 0.4153 MRICFLRQHQFSTSTLNLIQNIFKNKERETETRRERSLSNNTIYYDRIKPLSLLCVLSSIFSIILLFIIIPHCSLFVLREQYLKCQDRKPCHTQVVIEAATMNMCSKCYKDTLLKQEQDKLAATSVENIVNGNSSGNGKLAVTTAAVDVQVGTVEVNTACPEVPENSIFAESVEVKAKTGPSRCTTCRKRVGLTGFSCKCGNLFCSMHRYSDKHDCPFDYRTDGQKAIAEANPVIKADKLDKI 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03399 243 SMART AN1_Zf_4 184 221 IPR000058 GO:0008270
Tsu07g03399 243 Pfam AN1-like Zinc finger 184 220 IPR000058 GO:0008270
Tsu07g03399 243 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8 98 243 - -
Tsu07g03399 243 SUPERFAMILY AN1-like Zinc finger 175 238 IPR035896 -
Tsu07g03399 243 ProSiteProfiles Zinc finger AN1-type profile. 178 224 IPR000058 GO:0008270
Tsu07g03399 243 Gene3D - 98 133 - -
Tsu07g03399 243 Gene3D - 161 239 IPR035896 -
Tsu07g03399 243 PANTHER AN1-TYPE ZINC FINGER PROTEIN 98 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03399 Tsu-Chr7 40415119 40418349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03399 99 243 C2H2 Transcription Factor Family AT3G52800 39.865 6.45e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03399 - - mtr:MTR_7g092400 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03399 07 40415119 40418349 Tsu07g03399 07 40415119 40418349 ECH