Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu07g03397 | ATGAATCTGATTGCAAAACTGAATAACCCTTATATTGTGGATTACAAAGATGCTTGGGTGGAGAAGGAGGACCATGTATGCATTATAACTGGCTATTGTGAAGGAGGTGACATGGCGGAGAGTATTAAGAAAGCTCGAGGATCATTTTTCCCGGAGGagAAGGTCTGCAAATGGCTGACTCAATTGTTGATAGCTGTAGATTACTTGCACTCTAACCGTGTAATCCACAGGGATCTTAAGTGTTCCAACATATTCCTCACCAAGGAGAACAGTATTCGGCTCGGTGATTTTGGTCTTGCAAAGCGACTAAATGGAGAAGACCTCGCTTCCTCGGTCGTTGGAACTCCAAATTACATGTGTCCTGAGCTCCTCGCGGACATACCATATGGTTATAAATCTGATATATGGTCTCTCGGTTGCTGCATGTTTGAGATTGCTGCACATCAGTCAGCATTTCGTGCTCCGGACATGGCTGGtctaatcaataaaataaacagATCCTCCATTTCTCCACTTCCAATTGTTTACTCTCCCACACTGAAACAAATTATCAAGAGCATGCTGAGGAAAAATCCAGAACATAGGCCAACAGCTGCCGAATTGTTAAGACATCCACATTTACAACCTTATGTTATTCGCTGTCAGACCGCATCGTCTAATGTTCTTCCAATATATCCCCTAGTTAACTCAAAGGATAAAACAAAAAGATCTCCCAAATCTAGTGGCAGAGAAATGGGGTTTGTAAATCGTTTGGAACGAGTTCATCCGATTGAGGGAAATGGTGATGTACAGACAAGAAATCTTCGTAACAATGGCGAGGTAACAATCTCAACAAGCACCCAATACAACCTTGAGACCAAGATGGACGCTCTTACAAGCTACACAGTCGAATCTTCTACTAGTATTAGTGACTCAAAAGATGGTTCAACAACATCTGAATCAACTACTTGTAGTGTGTGCAAGGAGGACTATAAAATTAGACCACCAAGGGAAATGGCTAACAATGGAATCACCTCGAAGAGTATACACGATTCTCTGCATGAAGAAGAACAAAGATTTGCTGCGGCGACCACCGAAGTTGAAGATACCTTCTCGAGGGAAGGTTTTGGTAATGCCGAAGCGCAGAGGGAACATGCCAAATTTGATGACCTCAGGAAATCAACTACTTCCAGTGCCGGAAGTAGCAGCACTGACAAAAGCAATTCAATCAACGAGGAAAGTTCATCGCTAATTATGCATCCTCTCAGGGTTGAACATGACAGTACCCAGTCCGGAGACTActtgaagaaaaatgaaagccGTGATTCCCTTACAGAAGAAGGCTTGCATATAAACGGCTTGTCGTCAGAGAGTATTGATAATCATAATACTGATACACTTGCAGTTAAGGATGATAGTATAGCAAAACAACACATTATTTTCCCCACACAGAAAGATGATAATGTAACACCAAACGGCATTTCATTGAGTGTAGTTACTGCAACAGATGGTGACGGCGACGAAACAATCAAGGATGCATTGGATAGTCCATGCCAGAAAAGAGCTGATGCATTGGAATCTCTGCTTGAGTTATGTGCTCAGTTACTTAAACAAGATAAACTTGAAGAGCTTGCTGGTGTGCTAAGACCATTTGGAAAAGAAGCTGTATCATCAAGAGAAACAGCAATATGGTTGACAAAAAGCCTTATGTCTGCTCAAAAGTTTAACCCTGAAAACTAG | 1719 | 0.4113 | MNLIAKLNNPYIVDYKDAWVEKEDHVCIITGYCEGGDMAESIKKARGSFFPEEKVCKWLTQLLIAVDYLHSNRVIHRDLKCSNIFLTKENSIRLGDFGLAKRLNGEDLASSVVGTPNYMCPELLADIPYGYKSDIWSLGCCMFEIAAHQSAFRAPDMAGLINKINRSSISPLPIVYSPTLKQIIKSMLRKNPEHRPTAAELLRHPHLQPYVIRCQTASSNVLPIYPLVNSKDKTKRSPKSSGREMGFVNRLERVHPIEGNGDVQTRNLRNNGEVTISTSTQYNLETKMDALTSYTVESSTSISDSKDGSTTSESTTCSVCKEDYKIRPPREMANNGITSKSIHDSLHEEEQRFAAATTEVEDTFSREGFGNAEAQREHAKFDDLRKSTTSSAGSSSTDKSNSINEESSSLIMHPLRVEHDSTQSGDYLKKNESRDSLTEEGLHINGLSSESIDNHNTDTLAVKDDSIAKQHIIFPTQKDDNVTPNGISLSVVTATDGDGDETIKDALDSPCQKRADALESLLELCAQLLKQDKLEELAGVLRPFGKEAVSSRETAIWLTKSLMSAQKFNPEN | 572 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu07g03397 | 572 | PANTHER | SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN | 411 | 555 | - | - | |
Tsu07g03397 | 572 | PANTHER | SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN | 1 | 407 | - | - | |
Tsu07g03397 | 572 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 255 | IPR011009 | - | |
Tsu07g03397 | 572 | ProSiteProfiles | Protein kinase domain profile. | 1 | 207 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu07g03397 | 572 | MobiDBLite | consensus disorder prediction | 299 | 318 | - | - | |
Tsu07g03397 | 572 | MobiDBLite | consensus disorder prediction | 419 | 434 | - | - | |
Tsu07g03397 | 572 | Pfam | Protein kinase domain | 2 | 206 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu07g03397 | 572 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 74 | 86 | IPR008271 | GO:0004672|GO:0006468 | |
Tsu07g03397 | 572 | MobiDBLite | consensus disorder prediction | 386 | 409 | - | - | |
Tsu07g03397 | 572 | SMART | serkin_6 | 1 | 207 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu07g03397 | 572 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 249 | - | - | |
Tsu07g03397 | 572 | MobiDBLite | consensus disorder prediction | 371 | 385 | - | - | |
Tsu07g03397 | 572 | PANTHER | SERINE/THREONINE-PROTEIN KINASE NEK | 411 | 555 | - | - | |
Tsu07g03397 | 572 | PANTHER | SERINE/THREONINE-PROTEIN KINASE NEK | 1 | 407 | - | - | |
Tsu07g03397 | 572 | MobiDBLite | consensus disorder prediction | 368 | 434 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu07g03397 | Tsu-Chr7 | 40402901 | 40407271 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu07g03397 | 1 | 208 | MAP Kinase Kinase Kinase | AT3G13530 | 35.407 | 2.41e-32 | 131 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | NEK | Tsu07g03397 | Pkinase | 2.1e-52 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu07g03397 | K08857 | - | gmx:100793379 | 808.52 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu07g03397 | 07 | 40402901 | 40407271 | Tsu07g03397 | 07 | 40402901 | 40407271 | ECH | |
Tsu07g03397 | 07 | 40402901 | 40407271 | Tsu01g01907 | 01 | 19168731 | 19176832 | PCT |