Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03389 ATGATGGATACTTGCAAGAAATCTCCCTTGAAGCCATGGAAGAAAGGGCCAACTAGGGGTAAAGGTGGCCCTCAAAATGCTTCGTGTGAATATCGAGGCGTTCGTCAAAGAACGTGGGGCAAATGGGTTGCTGAGATAAGAGAGCCAAAGAAGAGAACTAGACTCTGGCTTGGTTCTTTCGCAACTGCGGAAGAAGCTGCCATGGCTTATGATGAGGCTGCAAGGAGACTCTACGGACCAGATGCATACCTTAATCTTCCTCACCTGCAACCACACTCGGTTTCGTCTATCAAAACTGGAAAGTTCAAGTGGTTGCCTTCAAAGAATTTCATTTCAATGTTTCCTTCTTGCGGATTACTCAATGTAAATGCTCAACCTAGTGTTCATTTAATCCATCAGAGGCTACAACAGTTTAAGCAGAATGCAGTTGCTGCAAGTCAATCATCGCTTTCTAGTTCATCTAATGATCCAAAGGCAGAAGAAATTCAGAAAGTAGAGAGCAACAAGAATCATGCAGAAAATCCTCCAAAGGAAAAAGATGTTCAAGTATCGGCGAATAAGATGTTTGGAGATTTTCAAGAGGAGAAACCACAGATAGACCTACATGAGTTTCTTCAACAGATGGGAATACTGAAAGAAGAAACACACTCAGAGCAAACTGAGAGTTCAGGAAGTTCAACAGTGCATGAAGCTGTGTCAAAAGATGATAATCAATTAGGAATATTTTCTGACACGAATGTTAATTGGGAGGCATTGATCGAGATGCATGGATTTGCAGATATTCCGGAATCAGAAGCCACACAGCTCGAAGCATATGACCCGAATGACCACCTTAATTTCTCAACTTCCATTTGGAACTTTTAA 864 0.419 MMDTCKKSPLKPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEAARRLYGPDAYLNLPHLQPHSVSSIKTGKFKWLPSKNFISMFPSCGLLNVNAQPSVHLIHQRLQQFKQNAVAASQSSLSSSSNDPKAEEIQKVESNKNHAENPPKEKDVQVSANKMFGDFQEEKPQIDLHEFLQQMGILKEETHSEQTESSGSSTVHEAVSKDDNQLGIFSDTNVNWEALIEMHGFADIPESEATQLEAYDPNDHLNFSTSIWNF 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03389 287 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Tsu07g03389 287 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 2 284 - -
Tsu07g03389 287 SUPERFAMILY DNA-binding domain 30 88 IPR016177 GO:0003677
Tsu07g03389 287 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2F 2 284 - -
Tsu07g03389 287 CDD AP2 29 89 IPR001471 GO:0003700|GO:0006355
Tsu07g03389 287 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Tsu07g03389 287 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Tsu07g03389 287 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Tsu07g03389 287 Pfam AP2 domain 29 79 IPR001471 GO:0003700|GO:0006355
Tsu07g03389 287 Gene3D AP2/ERF domain 30 88 IPR036955 GO:0003700|GO:0006355
Tsu07g03389 287 MobiDBLite consensus disorder prediction 146 181 - -
Tsu07g03389 287 MobiDBLite consensus disorder prediction 1 28 - -
Tsu07g03389 287 MobiDBLite consensus disorder prediction 159 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03389 Tsu-Chr7 40321886 40322857 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03389 6 287 AP2-EREBP Transcription Factor Family AT3G57600 51.034 2.74e-88 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tsu07g03389 AP2 2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03389 - - gmx:100801311 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03389 07 40321886 40322857 Tsu07g03389 07 40321886 40322857 ECH