Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03375 ATGGATATGCTTCAAAAGGAGTGTTTCCTTAGGTTAGGATTGTTGCTATGTGTTTCATTTGGCTTCTTGCTACATCCTGTTGTAACAGCTGTAATACCATTAGGTTCCAAACTTTCTGTGGTTGATAATGATTTTTGGGTTTCCTCCAATGGCGATTTTGCATTCGGGTTCTTTAGCATTACTGATGAACCTAACCAGTTTAGTGTTGGCATTCGTTTCAATTCGAAGTCTATTCCTTATAGTCAACAAACACTTGTATGGATTGCTGGTGCTCATGTCAAAGTAAGCAACATGTCCTATTTCCAACTCACTCCACAAGGGGAACTTGTCTTGTTTGATTCCTTACATGGAGTTATTGGGTGGAGCAGTCAAACAGGAAACCGATCTGTTGTTTCGGCTGTGCTTCATGATAATGGAAATCTTGTTCTGATagacacaaaacaaaacattatttGGCAAAGTTTTGATACTCCTTCTGATACACTTCTCCCAGGACAGAGTTTATCTGTTTACGAGACGCTTCGTGCTTCAACCAAGAACCCTCAGACTAGTTACTACACTCTTTACTTGAATGCTTCTGGTCGGTTACAACTTCGTTATGAGAGTAATGTTGTATACTGGAGTAGTGAAAGCCCTTCTACTGCAAATCTCACTGCATTCCTTACAACCGACGGATCTCTTCAACTTCGAGACCAAAAATTTAAATCTGTTTGGAGTGTATTCGGAGAAGACCACAACGATTCTGTGAGTTATCGATTTCTTAGGCTAGATTTGGATGGAAATCTCCGGTTATACTCATGGACAGAAGCTTCACAATCATGGAGATCTGTTTGGCAAGCTGTTGAGAATCAATGCAAAGTCTTTGCTACATGTGGCAAACGCGGTGTCTGTGTCTTCAATGCTTCAGGTTCTGCCGAGTGCAGGTGCCCTTTCAAGGTAACCGATGCTAACAATTGTTTGGTTCCGTATGAACATGACTGTGCTTCTGGCATCGATATGCGACGATATAAGAACATATATCTATATGGAATCTACCCTCCTGATGATCCTGTCATCACAAGTAGTTTGCAGCAATGCGAACAGTTGTGCCTGAATGACTCTCGGTGTACGGTTGCGACCTTTTCCAACAATGGTAGTCCACAATGCTCCATAAAGAAAACTAATTACATAACTGGCTACGAAGATCCATCTCTAAGCACAATATCATTTGTTAAGAGCTGCTCAGATCCATTTGCTGCAGATCCTGGTCTCAAGAAGTCGCCTCCACGAAAACCGTCTCCTCAGAGGCTTTGTGTTCGTTGCATGGTAGGGGCAGCCTCAGGAACATTTGTGATCTTTGCTTTTGTCCAGCTGGGAATTGTTTTCTTCATCCGTAGAAGAAAAAGCTCTATCATGGGAAGAGTTGCATTAGCATTCGCATTCCCAAATTCAAAAGGCTTAATGGTGTTATCCTTTGCAGAAATCAAGAGTATCACAGGAGATTTCAAGAATCGAATAGGACCAAATATGTTCAAGGGTGTGCTACCGAGCAATTGTCTGGTTGCAGTCAAAGACCTGAATGCATCCATAGAAGAAAGGAAGTTCAGGAGCGCTGTGCTGAAGATAGGTAGCATCCACCACAAAAACCTAGTGAAGCTGGAGGGCTATTGTTGCGAGTTCAATAATCGATATTTGGTGTATGAATACGCTAAAAACGGTTCGTTGGACAAGTATTTAGATGACTCTACTCTTTGCAAGAGGCTAACTTGGAGAAACAGAATTGAAATATGCTCGAGTGTGGCGAAGGCCATCTGTTATTTGCATTCAGGGTGCAGGGAATTTATAAGCCATGGAAATTTGAAATGTGAGAATGTGATGTTGGATGAAGATTCAGTTGCTAAGGTATCTGAATATGGATTTGCAATAGTGGATGGCGAGGCTACATACTGCGGCTTTTCAGCTGTAAAAGATGTAGGAGATTTTGGCAAATTAGTAGTAACCTTGTTGACCGGGCAGCGAGATCACGAACAAGTTTGCGAATGGGCTTACGAAGAATGGAAGGAAGGAAGGATAGCTAATGTGGTTGATAAGAGAATCGAAGGTGGTGCTATTACAGAAGAACTCGAACGTGCGTTAAGAATTGCATTCTGGTGCATTCAAATGGACAAAGATAAAAGACCACCAATGGAAGAGGTAGTGAGAGTACTAGATGGTACATTGAATGTTGATCCACCACCATCTCCATTTCAGTTGCCTTGTAATCCACAAGAAAATGGTTCAGAATCAGAATTAGAATCAGTGGTTTAG 2286 0.4143 MDMLQKECFLRLGLLLCVSFGFLLHPVVTAVIPLGSKLSVVDNDFWVSSNGDFAFGFFSITDEPNQFSVGIRFNSKSIPYSQQTLVWIAGAHVKVSNMSYFQLTPQGELVLFDSLHGVIGWSSQTGNRSVVSAVLHDNGNLVLIDTKQNIIWQSFDTPSDTLLPGQSLSVYETLRASTKNPQTSYYTLYLNASGRLQLRYESNVVYWSSESPSTANLTAFLTTDGSLQLRDQKFKSVWSVFGEDHNDSVSYRFLRLDLDGNLRLYSWTEASQSWRSVWQAVENQCKVFATCGKRGVCVFNASGSAECRCPFKVTDANNCLVPYEHDCASGIDMRRYKNIYLYGIYPPDDPVITSSLQQCEQLCLNDSRCTVATFSNNGSPQCSIKKTNYITGYEDPSLSTISFVKSCSDPFAADPGLKKSPPRKPSPQRLCVRCMVGAASGTFVIFAFVQLGIVFFIRRRKSSIMGRVALAFAFPNSKGLMVLSFAEIKSITGDFKNRIGPNMFKGVLPSNCLVAVKDLNASIEERKFRSAVLKIGSIHHKNLVKLEGYCCEFNNRYLVYEYAKNGSLDKYLDDSTLCKRLTWRNRIEICSSVAKAICYLHSGCREFISHGNLKCENVMLDEDSVAKVSEYGFAIVDGEATYCGFSAVKDVGDFGKLVVTLLTGQRDHEQVCEWAYEEWKEGRIANVVDKRIEGGAITEELERALRIAFWCIQMDKDKRPPMEEVVRVLDGTLNVDPPPSPFQLPCNPQENGSESELESVV 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03375 761 CDD B_lectin 47 158 IPR001480 -
Tsu07g03375 761 Gene3D Hepatocyte Growth Factor 342 409 - -
Tsu07g03375 761 SMART blect_4 37 158 IPR001480 -
Tsu07g03375 761 SUPERFAMILY alpha-D-mannose-specific plant lectins 176 276 IPR036426 -
Tsu07g03375 761 SMART ntp_6 328 406 IPR003609 -
Tsu07g03375 761 PIRSF SRK 2 643 IPR024171 GO:0004674
Tsu07g03375 761 PIRSF SRK 640 760 IPR024171 GO:0004674
Tsu07g03375 761 Gene3D Phosphorylase Kinase; domain 1 462 562 - -
Tsu07g03375 761 Gene3D - 29 157 IPR036426 -
Tsu07g03375 761 SUPERFAMILY Protein kinase-like (PK-like) 485 729 IPR011009 -
Tsu07g03375 761 Pfam D-mannose binding lectin 84 171 IPR001480 -
Tsu07g03375 761 MobiDBLite consensus disorder prediction 736 761 - -
Tsu07g03375 761 MobiDBLite consensus disorder prediction 746 761 - -
Tsu07g03375 761 ProSiteProfiles Protein kinase domain profile. 474 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03375 761 Pfam Protein tyrosine and serine/threonine kinase 511 635 IPR001245 GO:0004672|GO:0006468
Tsu07g03375 761 ProSiteProfiles PAN/Apple domain profile. 327 407 IPR003609 -
Tsu07g03375 761 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 10 756 - -
Tsu07g03375 761 Gene3D Transferase(Phosphotransferase) domain 1 563 646 - -
Tsu07g03375 761 Gene3D Transferase(Phosphotransferase) domain 1 647 738 - -
Tsu07g03375 761 Gene3D - 158 294 - -
Tsu07g03375 761 ProSiteProfiles Bulb-type lectin domain profile. 159 277 IPR001480 -
Tsu07g03375 761 ProSiteProfiles Bulb-type lectin domain profile. 31 156 IPR001480 -
Tsu07g03375 761 Pfam S-locus glycoprotein domain 246 309 IPR000858 GO:0048544
Tsu07g03375 761 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 161 IPR036426 -
Tsu07g03375 761 Pfam PAN domain 334 391 IPR003609 -
Tsu07g03375 761 PANTHER OS07G0415500 PROTEIN 10 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03375 Tsu-Chr7 40203349 40207037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03375 477 729 Receptor kinase-like Gene Family AT3G45860 30.137 2.29e-37 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu07g03375 PK_Tyr_Ser-Thr 2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03375 - - gmx:100809478 1199.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03375 07 40203349 40207037 Tsu07g03375 07 40203349 40207037 ECH