Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03371 ATGGGAAATTGCTGTGTTACCCCTGCAGTAGCAGGTGAAGAAATaacaaacaagaaaaacaaaaagggCAAAAAAGAGAATCCATTCGCACTCGATTACGgtttcaacaacaacaacaccacaTCGAAACTCACCGTTTTGAAAGATCCAACAGGTCGTGAAATAGAGAATCGTTATGAGCTAGGTAGAGAACTAGGAAGAGGTGAATTTGGTGTAACGTATTTATGTACAGATAAAGAAAGTAGAGAAGAACTAGCTTGTAAGTCAATATCAAAGAAGAAACTTAGAACTGCGATTGATATTGAAGATGTTAGAAGAGAAGTTGAAATTATGAGACATATGCCACAGCATAATAATATTGTTACGTTGAAAGATACTTATGAAGATGATAATGCTGTTCATCTTGTTATGGAACTTTGTGAAGGTGGTGAACTTTTTGATAGGATTGTTGCTAGAGGTCATTATACTGAACGTGCTGCTGCTGCTGTTACTAAAACTATTGTTGAAGTTGTTCAGATGTGCCACAAACATGGTGTGATGCATAGGGATCTCAAGCCTGAGAACTTTTTGTTTGCAAATAAGAAGGAAACAGCAGCATTGAAAGCTATTGATTTTGGATTGTCAGTGTTCTTTAAACCAGGTGAAAGATTTAATGAGATTGTTGGAAGTCCATATTACATGGCTCCCGAGGTATTGAAGAGAAATTATGGCCCAGAAGTTGATATCTGGAGTGCTGGAGTTATTCTGTACATCTTACTTTGTGGTGTTCCTCCATTTTGGGCAGAAACTGAGCAAGGAGTTGCCCAAGCAATTATCCGATCTGTTGTTGATTTCAAAAGGGATCCATGGCCAAAGGTTTCTGATaatgcaaaagaccttgtgaaGAAGATGCTCAATCCTGACCCAAAGCGGCGACTTACTGCACAAGAAGTGTTAGATCATCCATGGTTAATAAATGCAAAGAAAGCTCCCAACGTTTCATTAGGAGAAACAGTTAGAGCAAGGTTAAAGCAGTTTTCTGTAATGAACAAGCTTAAGAAAAGAGCTTTGAGGGTAATTTTCTTAACGATATTTGAATGTTGCTTGGGGAATCATCCCTTAAACGTTAATCCATTTGACCATTTTCATGAGTCACTCAGGTTTCTTCTACAACTAATGTTTCTTGTATGA 1170 0.3581 MGNCCVTPAVAGEEITNKKNKKGKKENPFALDYGFNNNNTTSKLTVLKDPTGREIENRYELGRELGRGEFGVTYLCTDKESREELACKSISKKKLRTAIDIEDVRREVEIMRHMPQHNNIVTLKDTYEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTKTIVEVVQMCHKHGVMHRDLKPENFLFANKKETAALKAIDFGLSVFFKPGERFNEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVVDFKRDPWPKVSDNAKDLVKKMLNPDPKRRLTAQEVLDHPWLINAKKAPNVSLGETVRARLKQFSVMNKLKKRALRVIFLTIFECCLGNHPLNVNPFDHFHESLRFLLQLMFLV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03371 389 SMART serkin_6 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03371 389 PANTHER SERINE/THREONINE-PROTEIN KINASE 18 353 - -
Tsu07g03371 389 Gene3D Transferase(Phosphotransferase) domain 1 146 361 - -
Tsu07g03371 389 Pfam Protein kinase domain 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03371 389 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 32-LIKE 18 353 - -
Tsu07g03371 389 CDD STKc_CAMK 58 316 - -
Tsu07g03371 389 Gene3D Phosphorylase Kinase; domain 1 61 145 - -
Tsu07g03371 389 SUPERFAMILY Protein kinase-like (PK-like) 41 335 IPR011009 -
Tsu07g03371 389 ProSiteProfiles Protein kinase domain profile. 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03371 389 ProSitePatterns Protein kinases ATP-binding region signature. 65 88 IPR017441 GO:0005524
Tsu07g03371 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03371 Tsu-Chr7 40131326 40136334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03371 1 353 EF-hand Containing Proteins AT3G57530 82.402 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tsu07g03371 Pkinase 3.9e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03371 K13412 - gmx:100790745 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03371 07 40131326 40136334 Tsu07g03371 07 40131326 40136334 ECH
Tsu07g03371 07 40131326 40136334 Tsu01g01875 01 18816234 18821081 PCT