Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03363 ATGGAAATTCTGTGTTTGTTGCATATTGTGTTAGGTTGGTATCTTTCGAATGTTGAGTTTGTTGTAGGTGCTGAGTTACAGGACCAAGCTATAATACATGCAATCAATCAAGAGCTTAGAGTTCCTGAATGGAGTGATGCAAACATTTCAGATTACTGCAGTTGGCAAGGGGTTTTCTGTAGCAATCATTCAATGGTGGAAAAGCTTGATCTTTCTCATAAGAACCTTAGAGGTAATGTAACTTTAATGTCTGAACTCAAAAGTTTGAAGTTACTTGATCTTTCAAATAATAACTTTGGTGGATTGATTCCTCTTGCTTTTGGAACTTTATCTGAGCTTGAAGTTCTAGATTTGTCTTCTAATAAGTTTGAAGGTTCAATTCCATCACAGTTTGGTGGTCTCAAAAGCTTAAAATCATTAAACCTTTCTAATAATTTGCTTGTTGGTGAGTTTCCAATTGAACTTCATGGCTTAAAGAAATTGCAGGATTTGCAACTTTCTAGTAATCAATTGAGTGGTTTTATACCTTCTTGGGTGGGGAATTTAACCAATTTGAGGGTTTTTTCGGCTTATGAGAACCATTTAGATGGTAGAATTCCAGATAATCTAGGCTTGATTCCTGAACTTCAGATACTTAACCTGCATTCTAACCGGCTTGAAGGTCCAATACCATCGAGCATTTTCACTTCCGGAAAGCTAGAAGTTCTGGTTCTCACTCAGAATAATTTTAGTGGTGATCTTCCTGAGGAAATTGGGAACTGTCATGCCCTTTCAAGCATTAGAATTGGAAACAACCATCTTGTAGGTAGCATTCCTAAGACCATTGGAAACCTTAGTAGCCTAACATACTTTGAAGCTGATAATAATAATCTTTCTGGTGAGCTAGTGTCGGAATTTGCTCAGTGTTCTAATCTCACCCTCTTGAATTTAGCTTCAAATGGATTTTCTGGAACTATTCCGCAGGAGTTTGGACAACTTATGAACCTTCAGGAATTAATTTTGTCTGGGAATAGCCTATTTGGTGATATTCCAAAACCAATTCTCAGTTGCAAAAGTCTCAATAAGCTTGATATTAGCAACAACAGATTCAACGGGACAATTCCAAGTGGAATCTGCAACATTTCTCGGTTGCAGTACTTGCTATTGAATCTGAATTCCATTAGAGGAGAGATCCCTCATGAAATTGGAAGTTGTGTAAAACTTCTTGAGTTGCAATTGGGGAGTAATTATTTGACTGGAACTATTCCTCCCGAGATCGGCCTCATCAGGAACTTACAGATAGCTTTAAATTTGAGCTTCAATCATCTCCATGGATCACTGCCGCCAGAATTGGGAAAGCTCGACAAACTTGTTTCTCTTGATGTTTCAAACAATCGGATATCAGGTAATATCCCAGCTGAGCTTAAGGGAATGTTGAGCTTGATAGAGGTGAATTTCTCGAATAATCTGTTGGATGGCCCTGTACCAACATTCATTCCGTTCCAGAAAAGTCCTACTTCGAGTTTTTTAGGCAATATAGGGCTTTGTGGAGACCCATTGAACTCTCCATGTGGAGATATTTATGATCACAGCAGTTACCATCACAAGGTTTCTTACAGAATCATACTGGCCGTAATTGGTTCTGGTTTGGCAGTTTTTGTGTCGGTAACAATAGTTGTCTTGCTGTTTATGATCAGAGAGAGGCAAGAAAAAGCAGCCAAAGAGGCTGCTGGTATTGTTGATGATCCAACCAATGACAAACCAACTATAATAGCAGGGACTGTTTTTGTCGATAATCTAAAACAAGCAATAGACCTTGAAGCCGTTGTTAACGCAACAATGAAAGACTCGAATAAGATCAGCAGTGGAACTTTCAGCTCAGTTTACAAAGCAACCATGCCTTCTGGTGTGGTCTTATCGGTAAGGAGACTGAAATCTGTGGACAAGACAATAATCAACCATCAGAACAAGATGATTCGAGAACTTGAAAGGCTAAGCAAAGTTTGTCACGATAATCTTGTGCGACCTATTGGCTATGTCATTTACGAAGATGTTGCTCTTCTCTTGCATAATTATTTTCCTAATGGAACATTATCTCAGCTTCTTCATGAATCTACCAAGCAACCTGAATATCAGCCTGATTGGCCAGCTAGGCTATCCATTGCCATCGGTGTCGCAGAAGGTTTGGCTTTCCTTCATCATGTTGCAATTATCCATCTTGACATTTCTTCTGGAAATGTTCTTTTGGATGCAAATTTCAAGCCATTGGTTGGAGAGATTGAGATTTCAAAACTTTTGGATCCAACCAGAGGCACCGGAAGTATTAGCGCAGTTGCAGGTTCCTTCGGTTACATACCGCCAGAATATGCATACACCATGCAAGTGACAGCACCAGGAAATGTTTACAGCTATGGTGTTGTTTTGCTGGAAATCCTTACATCTCGACAACCTGTTGAAGAAGATTTTGGCGAAGGTGTAGATTTGGTAAAGTGGGTTCATAGTGCTCCTGTAAGAGGAGAAACTCCAGAGCAGATACTTGATGCAAGACTCAGCACAGTTTCCTTTGGTTGGAGGAAAGAAATGCTTGCTGCTCTAAAGGTTGCGTTGCTTTGCACCGACAACACACCAGCCAAACGACCGAAAATGAAGAATGTTGTAGAAATGCTACGGGAAATCAAGTAA 2661 0.3965 MEILCLLHIVLGWYLSNVEFVVGAELQDQAIIHAINQELRVPEWSDANISDYCSWQGVFCSNHSMVEKLDLSHKNLRGNVTLMSELKSLKLLDLSNNNFGGLIPLAFGTLSELEVLDLSSNKFEGSIPSQFGGLKSLKSLNLSNNLLVGEFPIELHGLKKLQDLQLSSNQLSGFIPSWVGNLTNLRVFSAYENHLDGRIPDNLGLIPELQILNLHSNRLEGPIPSSIFTSGKLEVLVLTQNNFSGDLPEEIGNCHALSSIRIGNNHLVGSIPKTIGNLSSLTYFEADNNNLSGELVSEFAQCSNLTLLNLASNGFSGTIPQEFGQLMNLQELILSGNSLFGDIPKPILSCKSLNKLDISNNRFNGTIPSGICNISRLQYLLLNLNSIRGEIPHEIGSCVKLLELQLGSNYLTGTIPPEIGLIRNLQIALNLSFNHLHGSLPPELGKLDKLVSLDVSNNRISGNIPAELKGMLSLIEVNFSNNLLDGPVPTFIPFQKSPTSSFLGNIGLCGDPLNSPCGDIYDHSSYHHKVSYRIILAVIGSGLAVFVSVTIVVLLFMIRERQEKAAKEAAGIVDDPTNDKPTIIAGTVFVDNLKQAIDLEAVVNATMKDSNKISSGTFSSVYKATMPSGVVLSVRRLKSVDKTIINHQNKMIRELERLSKVCHDNLVRPIGYVIYEDVALLLHNYFPNGTLSQLLHESTKQPEYQPDWPARLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDANFKPLVGEIEISKLLDPTRGTGSISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTSRQPVEEDFGEGVDLVKWVHSAPVRGETPEQILDARLSTVSFGWRKEMLAALKVALLCTDNTPAKRPKMKNVVEMLREIK 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03363 886 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE TYROSINE-PROTEIN KINASE PXC3 1 886 - -
Tsu07g03363 886 ProSitePatterns Tyrosine protein kinases specific active-site signature. 730 742 IPR008266 GO:0004672|GO:0006468
Tsu07g03363 886 Gene3D Transferase(Phosphotransferase) domain 1 686 886 - -
Tsu07g03363 886 CDD STKc_IRAK 613 885 - -
Tsu07g03363 886 Gene3D Phosphorylase Kinase; domain 1 577 685 - -
Tsu07g03363 886 Pfam Protein tyrosine and serine/threonine kinase 610 882 IPR001245 GO:0004672|GO:0006468
Tsu07g03363 886 SUPERFAMILY Protein kinase-like (PK-like) 608 883 IPR011009 -
Tsu07g03363 886 Gene3D Ribonuclease Inhibitor 230 519 IPR032675 -
Tsu07g03363 886 Pfam Leucine rich repeat 88 147 IPR001611 GO:0005515
Tsu07g03363 886 PRINTS Leucine-rich repeat signature 89 102 - -
Tsu07g03363 886 PRINTS Leucine-rich repeat signature 110 123 - -
Tsu07g03363 886 ProSiteProfiles Protein kinase domain profile. 607 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03363 886 SUPERFAMILY L domain-like 37 293 - -
Tsu07g03363 886 Gene3D Ribonuclease Inhibitor 27 175 IPR032675 -
Tsu07g03363 886 Gene3D Ribonuclease Inhibitor 176 229 IPR032675 -
Tsu07g03363 886 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 886 - -
Tsu07g03363 886 SUPERFAMILY L domain-like 199 516 - -
Tsu07g03363 886 SMART LRR_typ_2 86 109 IPR003591 -
Tsu07g03363 886 SMART LRR_typ_2 447 470 IPR003591 -
Tsu07g03363 886 SMART LRR_typ_2 326 350 IPR003591 -
Tsu07g03363 886 SMART LRR_typ_2 374 398 IPR003591 -
Tsu07g03363 886 SMART LRR_typ_2 134 157 IPR003591 -
Tsu07g03363 886 SMART LRR_typ_2 110 133 IPR003591 -
Tsu07g03363 886 SMART LRR_typ_2 158 182 IPR003591 -
Tsu07g03363 886 SMART LRR_typ_2 206 230 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03363 Tsu-Chr7 40058433 40061183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03363 1 886 Receptor kinase-like Gene Family AT2G41820 71.879 0.0 1279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu07g03363 PK_Tyr_Ser-Thr 4.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03363 - - adu:107492611 1495.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03363 07 40058433 40061183 Tsu07g03363 07 40058433 40061183 ECH