Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03358 ATGGTGGCTTTGGTTGGATCGTTCCTCTTCAGAATGGCGGAGTCAATCATTGCACAACTTGCTTCTTGGACATTAGTAGAAGCTTCTCTGGTGCTTGGTGTTTACAATGATCTTCAACACTTCACACAAACTCTCTCATACATCAAAGCTGTGTTGTTGGATGCTGACCAAAAGCAGCAAAACCCAGACTATCAAAATTTTGAGCTAAGTGAATGGTTGTGGCTGGTCAGAGATGTCTTGTCTGATGCAAAAAATGTGCTGGATGAAGTTGAGTATGAAAATTTACGGAAGAAAGTGATCAAAGCGCGCAGCAGCAACAGAAACATGATAATAACCAAGGTAGATAACTTCTTCTCAAGTTCTAATCCACTTGTTTTTCGACATAGGATGTCACGAAAAATGAAACGAATAAACTCGAGATTAGATAAGATTGCTGCTGATAGGCACAAGTTTGGTTTTAATATAGTTGATGCTGACAGCCGTATTGTGCATAGGAGAGAACTTACATACTCTAGTGTGATTGATTCAGAAGTGATAGGAAGGGAACATGATAAGGAAAAGATCATAAAACTTTTGATTCAGCGTGATAATAACAAAAATCTCGCTATTATTCCTATTGTGGGGCTTGGAGGTGTGGGAAAGACCACACTTGCAAAGCTTGTATTCAATGATGAAAGGATTGACAAGTATTTTCCATTGAAAATGTGGGTGTGTGTTTCGGGAAGCTTTGATATTAAGGAAGTGATTATTAGAATCATCAGTTCTGCTAATGAATCTACTGATGATCCTCCTACTTACCAACAAAATTTCAGAGATTTGGATATCCAGCAGCTGCAAAACCATcttaaaaacaaacttaaagGTCAAAAGTTTCTACTCGTCTTGGACGATGTGTGGAATGAAGATCGTGTTAAATGGATTGAGTTGAAGGATTTAATACACGTAGGTGCGGTCGGAAGTCAACTCTTAGTGACTACACGTAATCACTCGATCGCTTCCATGATGGGCACCATTCCCTCTCACATATTAGTAGGCCTTTCTCTCGAGGATTCTTTGTTGGTTTTTGTCAATTGGGCATTTAAAGAAGGGGAAGCGAAAAAGTATCCACATTTGGTTGATATTGGGCGAGATATTGTGCAAAAATGTGGAGGAATTCCTTTGGCATTGAGAACATTAGGGAgttcactattttcaaaatacGATACAGATGAGTGGGAATGGGTAAGAGACAACCAAATTTGGAATGGCCGCATTCGGAATGCAGAAGACACGGGCAACATTTTACATGCACTTATGTTAAGCTATTATCAAATGCCGTGCTATCTCAAGGAATGCTTTGCTTTGTTCTCCCTTTACCCAAAGGACCATACATTTGATAGTTATGATATAACATCCCTTTGGAGAGCACTTGGTCTCCTTCCACCACCAATCATAAATCAAACCTCGAAATATAGTGCTAACCAATTCTTGCTTGAATTGTTATCAATTTCTTTCCTTCAAGATTTCATCGACTATGGTATTGGTTTTGCTTTTAAAATGCATGATTTAGTTCATTCTTGTGCTGCTACAATTGCACTGGTAGAATGCAAACTTGTAACAGATTCCATTGAAGGAAGGCGCGGGATATTTGTTCGACATCTGTCTTTCCCTGAAAACAAAGGACTTGACAAATTTCCCATTCGAAGATTTAAGAAACTGAGAAGCATACTATTTCCGACTGCTGGAATTGGAGCCAACAATGATGCTTTCTTGAATGCATGCACGTCAAGCTGCAAACACCTACGATTTTTGGATTTAAGTGATTCTACGTATGAGACCTTGCCTCAGTCCATTGACAAGCTGAAACATTTAAGATATATCAGTCTTGAGAATAATAGAAATCTTAAGAGACTTCCTGATTCTATTTTCAACCTTGTAATGTTAGAAATGTTGATACTTGGTGGATGTACTAAACTTGAAACACTGCCTAAAGGTTTGAGAAAATTGATCAGTCTCCAACATTTAGAGATAACAACAAAGCAGCGTGTTTTACCTGAGGATGAGATTGCAAACTTGAGTTCTCTTCAGACTTTAAGGATCGAGTTTTGCAACAATCTGGAGTCACTGTTTGGAGGGATAAAACTCCAATCTTTGAAAGTATTGTGTGTTACTAATTGCAGGAATCTAAAGTCGTTACCACTTGATATTGAACATGTTCCTGCATTAGAGACTCTTCTAGTTGACAACTGTGACACATTGGAATTTTCAGAGGGATGTGAGGACCAAATCTCCCACATGAGGTTGAAGGTTCTAACAATTGTTTCTCTGCACCAGTTGGTGACTTTGCCACATTGGCTTCAAGGGTCCGTGAATACATTACAATACTTGTCAATTTCAACCTGCAACAATCTTGTGGTACTTCCTCAGTGGCTCTCAACTATGAATTGTCTGAAAACATTTTGTATCACAGGCTGTCCTAATATAATGTCTCTCCCCAATGATATTATTCGCCTCAACACCCTTGAACGATTGGAAATTGATGGTTATCCTGAATTACTCAGAAAATCTCAGCAGGAAGTTGGAGAGTCTTCTCACACACACAATACCACTGACGAGCCAGATTTAGTGGAAGAAGAACTGGAGTAA 2625 0.3851 MVALVGSFLFRMAESIIAQLASWTLVEASLVLGVYNDLQHFTQTLSYIKAVLLDADQKQQNPDYQNFELSEWLWLVRDVLSDAKNVLDEVEYENLRKKVIKARSSNRNMIITKVDNFFSSSNPLVFRHRMSRKMKRINSRLDKIAADRHKFGFNIVDADSRIVHRRELTYSSVIDSEVIGREHDKEKIIKLLIQRDNNKNLAIIPIVGLGGVGKTTLAKLVFNDERIDKYFPLKMWVCVSGSFDIKEVIIRIISSANESTDDPPTYQQNFRDLDIQQLQNHLKNKLKGQKFLLVLDDVWNEDRVKWIELKDLIHVGAVGSQLLVTTRNHSIASMMGTIPSHILVGLSLEDSLLVFVNWAFKEGEAKKYPHLVDIGRDIVQKCGGIPLALRTLGSSLFSKYDTDEWEWVRDNQIWNGRIRNAEDTGNILHALMLSYYQMPCYLKECFALFSLYPKDHTFDSYDITSLWRALGLLPPPIINQTSKYSANQFLLELLSISFLQDFIDYGIGFAFKMHDLVHSCAATIALVECKLVTDSIEGRRGIFVRHLSFPENKGLDKFPIRRFKKLRSILFPTAGIGANNDAFLNACTSSCKHLRFLDLSDSTYETLPQSIDKLKHLRYISLENNRNLKRLPDSIFNLVMLEMLILGGCTKLETLPKGLRKLISLQHLEITTKQRVLPEDEIANLSSLQTLRIEFCNNLESLFGGIKLQSLKVLCVTNCRNLKSLPLDIEHVPALETLLVDNCDTLEFSEGCEDQISHMRLKVLTIVSLHQLVTLPHWLQGSVNTLQYLSISTCNNLVVLPQWLSTMNCLKTFCITGCPNIMSLPNDIIRLNTLERLEIDGYPELLRKSQQEVGESSHTHNTTDEPDLVEEELE 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03358 874 Gene3D - 434 523 IPR036388 -
Tsu07g03358 874 CDD RX-CC_like 27 145 IPR038005 -
Tsu07g03358 874 MobiDBLite consensus disorder prediction 849 866 - -
Tsu07g03358 874 SUPERFAMILY L domain-like 512 841 - -
Tsu07g03358 874 PRINTS Disease resistance protein signature 285 299 - -
Tsu07g03358 874 PRINTS Disease resistance protein signature 706 722 - -
Tsu07g03358 874 PRINTS Disease resistance protein signature 203 218 - -
Tsu07g03358 874 PRINTS Disease resistance protein signature 382 396 - -
Tsu07g03358 874 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 448 IPR027417 -
Tsu07g03358 874 Gene3D - 162 340 IPR027417 -
Tsu07g03358 874 PANTHER DISEASE RESISTANCE PROTEIN RP 22 828 IPR044974 GO:0006952
Tsu07g03358 874 MobiDBLite consensus disorder prediction 849 874 - -
Tsu07g03358 874 Pfam NB-ARC domain 181 435 IPR002182 GO:0043531
Tsu07g03358 874 Pfam Rx N-terminal domain 14 104 IPR041118 -
Tsu07g03358 874 Gene3D - 346 433 IPR042197 -
Tsu07g03358 874 Gene3D Ribonuclease Inhibitor 544 752 IPR032675 -
Tsu07g03358 874 Gene3D Ribonuclease Inhibitor 753 863 IPR032675 -
Tsu07g03358 874 PANTHER OS08G0543100 PROTEIN 22 828 - -
Tsu07g03358 874 Gene3D - 13 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03358 Tsu-Chr7 40030630 40033254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03358 593 691 WRKY Transcription Factor Family AT4G12020 36.000 5.50e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03358 - - gmx:121174109 1052.35