Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03354 ATGGCTGAATCATTTGTGTTTGATATTGCTGATTCACTGTTAGGAAAGCTTGCTTCTTATGCTTACCAAGAAGCTTCAAAAGCCTATGGTGTGTATGAAGATCTACAAGAGATCAAAGACACTTTGTCAATTGTCAGAGGTCTACTATTGGATGCTGAGGAGAAGAAGGACCAAAAGCATGGCTTGCGCGAATGGCTGCGGCAGATTCAAAACATATGCACCAACGCTGAAGATGTGTTGGATGGATTTGAGTGCCAAAAGATGCATAAGCAAGTTGTGGAAGCTTCTGGCAGCACTAGAATGAAGGTACAACACTTCTTTTCTTCCTCTAACTCGCTTGCTTTCCGCTTTAAGATGGCTCGTCAAATCAAAGATATTAAGGGTAGATTGGATAAGGTGGCTGCTGATGGGGCCAAATTTAGTCTTGCAACAATGAGTCTTGATCCTGGAATTATTGTGCAAAGGAGAGAAATAACTCATTCCCATATTGATTCTTTAGATGTGATAGGAAGGGAGAATGAGAGGGAAGAAATTGTTAAGCTTTTGATGCAACCACATCCTCAAGGTGATGGTGTTGGTGATAAAAGTTTGTGTGTTATTCCCATTGTGGGAATTGGAGGATTGGGGAAGACCACACTTGCTAAGTTGGTGTTCAACGATAAGAGGATGGATCAACTTTTTCAGTTGAAGATGTGGGTGTGTATCTCTGATGATTTTGACATTAGGCAAATAATGATTAAAATCATCAACTCTGCTTCAGCATCAGCTCCGACAACGGCTCTTGCTCACCAAGAAAACATTAGCAACTTTGATATTGAGCAACTACAAAGTCGTCTTCGTTATAAGCTTTCTGGTCAAAAGTTTTTGCTTGTATTGGACGATATATGGAATGACGATCGTGCAAAATGGCTACAATTAAAAGACTTAATAAAAGGTGGTGCAATAGGAAGCAAAATCATAGCAACAACACGTAGTAACTCAATTGCTACAATGATGGGTACATTCCCCTCATATGTGTTAGAAGGTCTTTCTCCACAAAATTGTTTATCTTTGTTTGTCAAATGGGCATTTAAAGACGGTGAAGAAGAAAAGTATCCAAATCTTGTGGAGATCGGAAAagaaattgtgagaaaatgTCGAGGGGTTCCACTAGCAGTGAGAACATTAGGAAGTTCCTTGttctcaaaatttgatttaaataagtGGATATTTGTAAGAGACTCCGAAATATGgaatttaaaacaaaacaaagatgaCATTTTACCTGCGCTTAAGTTAAGCTATGATCAAATGCCATCTCATTTGAGGCATTGCTTCACATACTTTTCACTTTATCCAAAAGATTTTGGCTTCACTAGTGTTCAAATTACTAAACTCTGGGTGGCACTGGGATTACTACAACCACAAGATGGTAATCAAAAGCTGGAGAACATTGCAAGAGATTATATAGATGAGTTACACTCAAGGTCATTTCTTCAAGAATTTGAGGACTTTGGTCATTTCTACTATTTCAAAGTACATGATTTGGTGCATGATCTTGCATTGTATGTTGCGAATGATGAGTGTGTAGTGGTAGACACCCATACTCGGAATATATCTGAGCAAGTAAGGCATTTCTCAATTGTTGAAAACGGTTCACTTGACAGTGCTTTATTCCCCAAGTCCACAAGTGTGAGAACTATACTATTTCCCATTGAAGGAGTCGGTCTTGAAAGTGAATCTATGTTGGATACGTGGGTATTGAGATACAAATACTTACGGATTTTAGATTTAAGTGATTCTTCATTTGAGACACTACCTAATTCAATCACTAAACTGAAGCACTTGCGTGTTCTCAACCTTTCCAATAACTGCAAAATCAAAAGACTTCCCCATTCTATTTGCAACCTTCAAATTTTGCAAGTTTTGTCACTCAGCGGATGCATGCAGTTTGAATCATTGCCTAAAGAATTAGGTAAGTTGATCAGCCTTCGACAGCTGTATATAACTACAAAACAGTCTGTGCTATCACAGAATGTATTTGCAAACTTGACCAATCTTCAAACTTTAAGTTTTGAATATTGTGACTCTTTGGAGCTTTTGTTTGATGGGGTACAACTCACTTCTCTTGAAACATTGATTGTTCGTTCTTGTGGAAGCCTTCAATCCTTACCTTCATATATTCTCCCAAGATTGGAGGCTCTGTTAGTCATTGATTGTAAGAGTTTAGACCTCAGCCCACCAGAGAATCACACTCTTCAAAATCCAACCCGAATATGGAAAATgacttttcttcatcttcagaaTAAAATCCCATGGCTATGGACTTTGCCTGAATGGATTGAAGGAGTTGCAGAGACTTTACAGACCTTGATACTTATAAATTTGTACGAACTTAGCAAGCTTCCAGAGTGTTTGACAAGAATGACTCGTCTTAAAATGCTTCATATTGCTGGCTGTCCTCGTTTGGATTATCTTCCAAGTGGCATGCAACACCTCACTGCCCTTGATGATTTGACCATAAATGGTTGTCCTGATTTATGTCGACAATGTCAGCCACATTCTGGTGAGTACTGGCCCATGATTTCTCACATTAAAGGTGTTTCCATTGGAGAACCAGGAGTAGAGGAACCTTCCATTAGAGAACCAGGAGTAGAGGAACCTCAGGAAGGAGGGGTATCTGAATCTCTCTTTAGCAACACTGATCAACTACCATACCTTTGgTCTGAGGTTGAGGACGGGTGA 2724 0.3825 MAESFVFDIADSLLGKLASYAYQEASKAYGVYEDLQEIKDTLSIVRGLLLDAEEKKDQKHGLREWLRQIQNICTNAEDVLDGFECQKMHKQVVEASGSTRMKVQHFFSSSNSLAFRFKMARQIKDIKGRLDKVAADGAKFSLATMSLDPGIIVQRREITHSHIDSLDVIGRENEREEIVKLLMQPHPQGDGVGDKSLCVIPIVGIGGLGKTTLAKLVFNDKRMDQLFQLKMWVCISDDFDIRQIMIKIINSASASAPTTALAHQENISNFDIEQLQSRLRYKLSGQKFLLVLDDIWNDDRAKWLQLKDLIKGGAIGSKIIATTRSNSIATMMGTFPSYVLEGLSPQNCLSLFVKWAFKDGEEEKYPNLVEIGKEIVRKCRGVPLAVRTLGSSLFSKFDLNKWIFVRDSEIWNLKQNKDDILPALKLSYDQMPSHLRHCFTYFSLYPKDFGFTSVQITKLWVALGLLQPQDGNQKLENIARDYIDELHSRSFLQEFEDFGHFYYFKVHDLVHDLALYVANDECVVVDTHTRNISEQVRHFSIVENGSLDSALFPKSTSVRTILFPIEGVGLESESMLDTWVLRYKYLRILDLSDSSFETLPNSITKLKHLRVLNLSNNCKIKRLPHSICNLQILQVLSLSGCMQFESLPKELGKLISLRQLYITTKQSVLSQNVFANLTNLQTLSFEYCDSLELLFDGVQLTSLETLIVRSCGSLQSLPSYILPRLEALLVIDCKSLDLSPPENHTLQNPTRIWKMTFLHLQNKIPWLWTLPEWIEGVAETLQTLILINLYELSKLPECLTRMTRLKMLHIAGCPRLDYLPSGMQHLTALDDLTINGCPDLCRQCQPHSGEYWPMISHIKGVSIGEPGVEEPSIREPGVEEPQEGGVSESLFSNTDQLPYLWSEVEDG 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03354 907 CDD RX-CC_like 2 134 IPR038005 -
Tsu07g03354 907 Pfam Leucine rich repeat 585 641 IPR001611 GO:0005515
Tsu07g03354 907 Gene3D - 153 335 IPR027417 -
Tsu07g03354 907 Gene3D - 10 124 - -
Tsu07g03354 907 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 738 - -
Tsu07g03354 907 PANTHER DISEASE RESISTANCE PROTEIN RP 6 738 IPR044974 GO:0006952
Tsu07g03354 907 Gene3D Ribonuclease Inhibitor 750 848 IPR032675 -
Tsu07g03354 907 Gene3D Ribonuclease Inhibitor 559 749 IPR032675 -
Tsu07g03354 907 PRINTS Disease resistance protein signature 604 620 - -
Tsu07g03354 907 PRINTS Disease resistance protein signature 379 393 - -
Tsu07g03354 907 PRINTS Disease resistance protein signature 199 214 - -
Tsu07g03354 907 PRINTS Disease resistance protein signature 282 296 - -
Tsu07g03354 907 ProSiteProfiles Leucine-rich repeat profile. 608 630 IPR001611 GO:0005515
Tsu07g03354 907 MobiDBLite consensus disorder prediction 866 894 - -
Tsu07g03354 907 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 441 IPR027417 -
Tsu07g03354 907 SUPERFAMILY L domain-like 505 856 - -
Tsu07g03354 907 Gene3D - 427 516 IPR036388 -
Tsu07g03354 907 Pfam NB-ARC domain 194 429 IPR002182 GO:0043531
Tsu07g03354 907 Gene3D - 342 426 IPR042197 -
Tsu07g03354 907 Pfam Rx N-terminal domain 12 100 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03354 Tsu-Chr7 39988986 39993321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03354 200 840 WRKY Transcription Factor Family AT5G45050 23.263 1.17e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03354 - - gmx:100794422 1214.13