Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03353 ATGGACATGGCcaaatcatttgtgtttgaTGTTGCTAATTCACTGTTAGGGAAGCTTGTTTCTTATGCTTATGAAGAAACTTCTCGTGCTTATGGTGTGTATGAAGATTTCCAAGGGTTCAGAGATACTCTATCAATTGTCCAAGGTCTACTGTTGGATTCTGAGGTAAAGAAGGAACTAAAGCATGGGTTGCGTGAATGGCTGAGGCAGATTCGTATCATATGCTCTGATGCTGAAAATGTATTCGATGGATTTGAGTTGCAacacaagaaaaaacaaattgtggAAGCTTCAGGAAGCACTCGGATGAAGGTAGCTGCTGATGGAATCAGGTTTGGTCTAGCAACAACAATCAGTGTTGATCATGGATTTGTTTTGCAAAGGAGTGAAATGACTTTTTCTCATATAGATGCTTTAGATGTAATAGGAAGGGATAATGATAGAGAAGAAATTATAAAGCTTTTGGTGAAGCCTCATCCTCATGGTGATAAGAGTTTGGGTGTTATTCCCATAGTGGGAATTGGAGGATTGGGGAAGACAACACTTGCAAAGTTGGTATTCAATGATAAAAGGATGGATGATCTTTTTCAATTGAAGATGTGGGTGTGTATCTCCGATGATTTTGACATTAGGAAGATAATTATTAAAATCATCACCTCTGCTTCAGATTCAAATTCAACGACTGCTCTTGCTTACCATGAGAACATTAACAACTTAGATATTGAGCAGTTGCAATGTCGTCTTCGACATAAGCTTTCTAATCAAAAGTTTTTGCTTGTATTGGATGATATATGGAATGATGATCGTGCAAATTGGATTAAATTAAAAGACTTGTTAAAAGGTTGTGCAATAGGAAGCAGAATCATAGGGACGACACGTAACAACTCAATTGCTTCGATGATAGGTACTTTTCCCTCATATGTTTTGGAAGGTCTTTCTCTAGATAATTGTTTATCTCTATTTGTCAAATGGGCATTTAAAGAAGGCGAAGAAGAAAAATATCCAAATCTAGTGGAGAttggaaaagaaattgtgaCAAAATGCAAAGGGGTTCCACTAGCAGTGAGAACTTTAGGAAGTTCCTTGTtcttaaaatttgatttaaaaaagtGGATATTTGTAAGAGACTCTGAAATATGgaatttaaaacaaaacaaagatgaCATTTTACCTGCGCTTAAGTTAAGCTATGACCAAATGCCATCTCATTtgaggcattgtttcacttacTTTTCTCTTTATCCAAAAGATTTTGTTTTCACTAATGATCAAATCACTCAACTCTGGGTGGGAATGGGATTAATAAAATCACAAGATGGAAATCAAAGTCTGGAGAATATTGCAAAAGATTTTATAGATGAGTTGCATTCAAGGTCATTTCTTCAAGATTTTGAGGACAATGGCCACTTCTACTCTTTCAAAGTACATGATTTGGTGCACGATCTTGCATTGTATGTTGCAAAAGATGAGTGTGTAGTATTAGACTCCCATACTCGGAATATATCTCAGCAAGTAAGGCATTTCTCTATTGTTGAAAGTGGTTCACTCGATAGTGCTTTATTTTCCAAGTCCAAAAGTGTGAGAACTATACTATTTCCCATGGAAGAAGTGGGTCTTCATAGTGAATCTATGTTGGATACATGGGTATCCAGATACAAATACTTATGGGTTTTAGATTTAAGTGATTCTACGTTTGGGACTCTACCTAATTCAATTGCTAAATTGGAGCATTTGCGTGTTCTCAACCTTTCTGATAACTACAAAATCAAAAGACTTCCTCATTCTATATGCAAACTCCAAAATTTGCAAGTTTTGTCACTCATTGGTTGCACGAATCTTGAAAATTTGCCTAAAGGATTAGGTAAATTAATCAGCCTTCGACAACTTTATATATCCACAAAGCAATCTGTTGTGTCACTAAATGAATTTGCAGGCTTGAGCAGTCTTCAAACTTTAAGCTTTGAATATTGTGACAATTTGGAGGTTTTCCTCGGAGAGGTACAACTCGCATCCCTTGAAGCATTGATTATTCGCTGTTGTGTAAAGCTTACATCATTACCTCTTTGTATACTCTCTCAACTGGAGGCTTTGCTAGTCAAAGATTGTATGAAGATTAGTCTGCCAGAGAATCTTCAAAACACAAAGAAAAGAAGGAGGATGAATTTTCTTCATGTTCAGAATTTTCCGAGGCTACAGACATTGCCTGAATGGATTGAAGAAGCTGCCGAGACTTTACAGACCTTGATAATTACAAATATACCTATGCTTTGGAAGCTTCCTGAGTGTTTGACAATAATGACTAGTCTTAAAATGCTACATATTGCTGATTGTCCTCGTTTGGGTAATCTTCCAAGTGGCATGCAACGCCTCACTGCCCTTGAAGCTTTGACCATAGATGGTTCTCCTAAATTATGTCGAAAATGTCAGCCACACTCTGGTGAGTACTGGCCCATGATTTCTCACATTAAACATGTTAACATTGGAGAACCAGAAGAAGAGGAGCCTCAGGAGGGAGAGGGATCTCTCTTTAGCAACGATGATCTACTACCGTACCTTAGGTAA 2562 0.3579 MDMAKSFVFDVANSLLGKLVSYAYEETSRAYGVYEDFQGFRDTLSIVQGLLLDSEVKKELKHGLREWLRQIRIICSDAENVFDGFELQHKKKQIVEASGSTRMKVAADGIRFGLATTISVDHGFVLQRSEMTFSHIDALDVIGRDNDREEIIKLLVKPHPHGDKSLGVIPIVGIGGLGKTTLAKLVFNDKRMDDLFQLKMWVCISDDFDIRKIIIKIITSASDSNSTTALAYHENINNLDIEQLQCRLRHKLSNQKFLLVLDDIWNDDRANWIKLKDLLKGCAIGSRIIGTTRNNSIASMIGTFPSYVLEGLSLDNCLSLFVKWAFKEGEEEKYPNLVEIGKEIVTKCKGVPLAVRTLGSSLFLKFDLKKWIFVRDSEIWNLKQNKDDILPALKLSYDQMPSHLRHCFTYFSLYPKDFVFTNDQITQLWVGMGLIKSQDGNQSLENIAKDFIDELHSRSFLQDFEDNGHFYSFKVHDLVHDLALYVAKDECVVLDSHTRNISQQVRHFSIVESGSLDSALFSKSKSVRTILFPMEEVGLHSESMLDTWVSRYKYLWVLDLSDSTFGTLPNSIAKLEHLRVLNLSDNYKIKRLPHSICKLQNLQVLSLIGCTNLENLPKGLGKLISLRQLYISTKQSVVSLNEFAGLSSLQTLSFEYCDNLEVFLGEVQLASLEALIIRCCVKLTSLPLCILSQLEALLVKDCMKISLPENLQNTKKRRRMNFLHVQNFPRLQTLPEWIEEAAETLQTLIITNIPMLWKLPECLTIMTSLKMLHIADCPRLGNLPSGMQRLTALEALTIDGSPKLCRKCQPHSGEYWPMISHIKHVNIGEPEEEEPQEGEGSLFSNDDLLPYLR 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03353 853 Pfam Rx N-terminal domain 12 97 IPR041118 -
Tsu07g03353 853 Gene3D - 312 395 IPR042197 -
Tsu07g03353 853 Pfam NB-ARC domain 147 398 IPR002182 GO:0043531
Tsu07g03353 853 Gene3D - 127 304 IPR027417 -
Tsu07g03353 853 SUPERFAMILY L domain-like 474 831 - -
Tsu07g03353 853 PANTHER DISEASE RESISTANCE PROTEIN RP 8 711 IPR044974 GO:0006952
Tsu07g03353 853 MobiDBLite consensus disorder prediction 830 853 - -
Tsu07g03353 853 Gene3D Ribonuclease Inhibitor 496 828 IPR032675 -
Tsu07g03353 853 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 410 IPR027417 -
Tsu07g03353 853 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 8 711 - -
Tsu07g03353 853 Gene3D - 12 108 - -
Tsu07g03353 853 PRINTS Disease resistance protein signature 168 183 - -
Tsu07g03353 853 PRINTS Disease resistance protein signature 251 265 - -
Tsu07g03353 853 PRINTS Disease resistance protein signature 348 362 - -
Tsu07g03353 853 PRINTS Disease resistance protein signature 597 613 - -
Tsu07g03353 853 Gene3D - 396 485 IPR036388 -
Tsu07g03353 853 Pfam Leucine rich repeat 556 608 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03353 Tsu-Chr7 39984263 39986913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03353 152 804 WRKY Transcription Factor Family AT5G45050 22.688 3.73e-12 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03353 07 39984263 39986913 Tsu07g03353 07 39984263 39986913 ECH