Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03341 ATGGCTTCGTCTTCCTCCGATCAAGTAAAATCTGCGGAAACCTCAGAAGCTTTGGCGGTTGCAAATGATCAGCTTTTACTGTATAGAGGATTGAAGAAAGCGAAGAAAGAGAGAGGTTGTACTGCTAAAGAACGAATCAGTAAAATGCCTCCGTGTGCCGCCGGTAAACGTAGCTCCATCTACCGTGGTGTTACTAGGCATAGATGGACTGGTCGTTATGAAGCGCATCTATGGGATAAAAGTACATggaatcagaatcagaataaGAAAGGGAAGCAAGTTTACTTAGGGGCATATGATGATGAGGAAGCAGCGGCTAGAGCGTATGATCTTGCTGCTCTCAAATATTGGGGTCCTGGGACTCTTATTAATTTCCCAGTGACTGATTATACAAGAGATCTCGAAGAAATGCAGAACGTTTCGAGAGAAGAATACCTTGCATCTTTGCGACGGAAGAGCAGTGGTTTTTCAAGAGGACTGGCAAAATATCGCGGACTCTCCAGACGATGGGAGCCATATGGCCGATTGACTGGATCAGATTACTTCAGTAGTATGCATTATGGTACAGGGGATGATTCAGCTGCAGAAAGTGAATATGTTGGTGGTTTCTGTATAGAAAGAAAGATTGATTTAACAAATCACATAAAATGGTGGGGATCTAATAAGAATCGACAATCTGATGCTGGAACAAGATTATCAGAAGAAAAGAAACATGGTTTTGCCGGAGGAGATATTTACAGTGAACTGAAAACATTGGAACAGAAAGTCCAACCGACAGAACCATACAAGTTGCCAGAGTTAGGACGGCTCCACAAtgagaaaaaacataaaagttCTTCAATGTCTGCCTTAAGTATATTGTCACAGTCTGCTGCTTACAAGAGCATGCAAGAGAAAGCGGCAAAAAGACAGGAAAATAGCACTGAtaatgatgagaatgaaaacaaaaatatagtcAATGAGTTGGATCGTGGAAAGGCAGTAGAGAAACCCTCAAATCATGATGGTGGCAATGATCGACTTGACATTGCAATGGGAATGAGTGGGGCGTTGTCTCTTCAAAGAAATGTTTACCCATTGACACCATTCTTATCTGCACCGCTTTTGACATCGTACAACACTGTTGATCCATTGGTAGATCCTGTTCTCTGGACGTCGCTCGTTCCTATGCTTCCTGCCAGCCTTTCTCGTCCAGCTGAGGTTACAAAGACCGAGACCGATTCAACATACACTATGTATCAGCCAGAGGAGTGA 1254 0.4139 MASSSSDQVKSAETSEALAVANDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSRGLAKYRGLSRRWEPYGRLTGSDYFSSMHYGTGDDSAAESEYVGGFCIERKIDLTNHIKWWGSNKNRQSDAGTRLSEEKKHGFAGGDIYSELKTLEQKVQPTEPYKLPELGRLHNEKKHKSSSMSALSILSQSAAYKSMQEKAAKRQENSTDNDENENKNIVNELDRGKAVEKPSNHDGGNDRLDIAMGMSGALSLQRNVYPLTPFLSAPLLTSYNTVDPLVDPVLWTSLVPMLPASLSRPAEVTKTETDSTYTMYQPEE 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03341 417 PANTHER BNAA03G19580D PROTEIN 12 415 - -
Tsu07g03341 417 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12 415 - -
Tsu07g03341 417 MobiDBLite consensus disorder prediction 298 337 - -
Tsu07g03341 417 Pfam AP2 domain 60 118 IPR001471 GO:0003700|GO:0006355
Tsu07g03341 417 Gene3D AP2/ERF domain 60 128 IPR036955 GO:0003700|GO:0006355
Tsu07g03341 417 ProSiteProfiles AP2/ERF domain profile. 60 126 IPR001471 GO:0003700|GO:0006355
Tsu07g03341 417 MobiDBLite consensus disorder prediction 295 341 - -
Tsu07g03341 417 PRINTS Ethylene responsive element binding protein signature 108 128 IPR001471 GO:0003700|GO:0006355
Tsu07g03341 417 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Tsu07g03341 417 SMART rav1_2 60 132 IPR001471 GO:0003700|GO:0006355
Tsu07g03341 417 SUPERFAMILY DNA-binding domain 59 127 IPR016177 GO:0003677
Tsu07g03341 417 MobiDBLite consensus disorder prediction 260 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03341 Tsu-Chr7 39870393 39874404 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03341 19 415 AP2-EREBP Transcription Factor Family AT2G41710 65.366 4.61e-170 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tsu07g03341 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03341 K09285 - gmx:100814117 715.687