Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03339 atggaAGGAGTAGTAATTAGTGAGAAGGGATTGTTGGAATGTGGAAGAAAGTGCACTCCATCACCTTTCTTGTTGAAGACATATATGTTGGTGGAGGATCCGGCTACGGATGATGTGATATCGTGGAACGAAGAAGGAACGGCGTTCGTGGTGTGGCAACCGGCGGAGTTTGCTCGTGATCTCCTTCCAACACTCTTCAAGCATAGCaacttttctagctttgtaCGCCAGCTCAATACCTATGGGTTTCGTAAAGTTGCAACAAATAGATGGGAGTTTTGCAATGAAAAGTTCAAGAAAGGTGAAAGAGAATTGCTTTCCGAGATTCGTCGAAGAAGAGCTTGGAGTAACAACAAGCAACATCAAATCATACAAAACCAAGATTCTGATGAAGATCAAAGGTCATCATCAACCTCATCATCCTCCGGTTATATTAATCTTGTGGATGAAAACAAGCGACTCAAGAAGGAGAATGCGGTTTTGAATTCGGAGCTAACAAGCATGAAATGGAAGTGTAAGGAGCTAGTTGATTTGGTTTCaatttataaccaaaaaaaGGAAGAGGAAGAAGCTAATGAGAATGATAAAAGGCCAATGCTGTTTGGAGTGAGATTAGATGTTCAACAAGGAGATAGAAGGATGAAGAGGAATAGAGCTGAGATTGGTGAAAACGCAAGTATTTTGTTGTCTCAATCATGCAAATAG 705 0.3943 MEGVVISEKGLLECGRKCTPSPFLLKTYMLVEDPATDDVISWNEEGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATNRWEFCNEKFKKGERELLSEIRRRRAWSNNKQHQIIQNQDSDEDQRSSSTSSSSGYINLVDENKRLKKENAVLNSELTSMKWKCKELVDLVSIYNQKKEEEEANENDKRPMLFGVRLDVQQGDRRMKRNRAEIGENASILLSQSCK 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03339 234 SMART hsfneu3 19 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu07g03339 234 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-3 6 234 - -
Tsu07g03339 234 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 6 234 IPR027725 -
Tsu07g03339 234 MobiDBLite consensus disorder prediction 118 144 - -
Tsu07g03339 234 Pfam HSF-type DNA-binding 23 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu07g03339 234 Coils Coil 144 192 - -
Tsu07g03339 234 SUPERFAMILY "Winged helix" DNA-binding domain 20 112 IPR036390 -
Tsu07g03339 234 MobiDBLite consensus disorder prediction 117 144 - -
Tsu07g03339 234 Gene3D - 15 113 IPR036388 -
Tsu07g03339 234 ProSitePatterns HSF-type DNA-binding domain signature. 62 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu07g03339 234 PRINTS Heat shock factor (HSF) domain signature 23 46 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu07g03339 234 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu07g03339 234 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03339 Tsu-Chr7 39839069 39841464 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03339 20 182 HSF AT2G41690 63.333 3.00e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Tsu07g03339 HSF_DNA-bind 3.6e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03339 K09419 - gmx:100802739 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03339 07 39839069 39841464 Tsu07g03339 07 39839069 39841464 ECH