Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03329 ATGGCAGAATCAATTGCTTTAGATATTGCTAATTCACTGCTAGGGATGCTCGGTTCTTATGCTTATGAAGAAGTTTCTCGAGCCTATGGTGTGTATGAAGATCTACAAGGGTTCAAAGACACTTTGTCGATTGTCAAGGGTATGTTGTTGGATGCTGAGGAAAAGAAGAACCAACAACATGCCTTGCATGAATGGCTAAGGCAGATTCAAAACATCTGCTTTGACGCTGAAGATGTATTGGATGAATTTCAGTTCCAAGACAAGCAAAAGGAAGTTGAGAAAGTTTCTGGAAGCACACGAGTGAAGGTACGCCACTTCTTTTCTTCCTCTAATCCAATTGTTTTCCGTCATAGGATGGCAAATCAAATCAAAGACATTACGGACAGATTGAAAAAGGTAGTAGCTGATGGGGACAAGTATTTGCTTAAAAGCGATGATTCCGGACTTGTTGTGAAACAAAGAGAAATGACATATCCTGATATTGATGCTTCAAGTGTTATAGGAAGGGAAAATGAGAAAGATGAAATTATCAATCTTTTGATGCAGCCACATCTTCACGGCCATGATGATGGTGATAACAGTATGAGTGTCATTCCAATAGTGGGAATTGGAGGATTGGGGAAGACCACACTTGCAAAGTCGGTGTTCAATGATAAGAGAGTGGATCAACTTTTCCAGTTAAAGATGTGGGCATGTGCCTCCGATGATTTCgacataaaaaagataatcATTCAAATCATCAACTCTGCCACTGTTTCCTTTTTAACTTCATCTTCCACGCCATCAAGTTGTCTTGCTCACCAAGAAAGCGTCAACAACTTAGAAATTGTGCAACTAGTAAATCGTCTGAGACTAAAAGTTTTAGGTCAAAAGATTTTAGTTGTGTTAGATGACGTATGGAACGTTGATCGTGCAAAGTGGCTTGAAttgaaagatttgataaaaGTTGGCGCACCAGGAAGCAAAATTATAGTGACAACACGTAGTAACTCAATTGCTTCAATGATGGGTGATGTTCCTTTCTATGTTTTGGAAGGTCTTTCTCCAAAGGATTGTTTATCTCTATTTGTCAAATGGGCATTCAAGGAagacgaagaaaaaaaaaatccaaatctaCTGAAGATTGGAAATGAAATGGTGAAAAAATGTCAGGGGGTTCCACTAGCTGTGAGAACATTAGCTAGTTCTCTTTTCTCAAACTTTGATATAAGTAAGTGGGGAAATGTCAGAGACTCTGAGGTGTGGAATTTAGAACAGAAGCAAGATGATATTTTACCTGCACTAAAATTAAGCTATGATCAAATGTCATCCGACTTGAGGCACTGTTTTGCTTATTTTTCCCTATATCCTAAAGATTATAGCTTCAATAGTTATGATATGTGTAATCATTGGGTTGCCCTTGGATTAGTGCAATGCCTTGATGAAAGTGAAACGCTAGAGCTTGTGACATTACCGGGATGGATTGCATGTGCCAAGGACACTTTAGAGACCTTGGTAATCAGTAATTTACCTCGTCTTAATATGCTTCCGGTGTTTCTAACTACAATGACTTGTCTTAAGAGGCTCTACATAACTAACTGTTTTCATCTCTTGAGTTTTACAAGTGACATACGTCGCCTCACCGCCCTTGAAGATTTGCACATAAAAGGTTGTCCTTTTTTGTGCAGCAGATGTGAGCCCCTATATGGCGACTACTGGCCCATGATTCGTGACATCAAAACTGTTTTCATTGGAAAAGTAACAAAAGAGGAGGAGGAGTTACCAGGTTATCCATTTTGA 1779 0.3817 MAESIALDIANSLLGMLGSYAYEEVSRAYGVYEDLQGFKDTLSIVKGMLLDAEEKKNQQHALHEWLRQIQNICFDAEDVLDEFQFQDKQKEVEKVSGSTRVKVRHFFSSSNPIVFRHRMANQIKDITDRLKKVVADGDKYLLKSDDSGLVVKQREMTYPDIDASSVIGRENEKDEIINLLMQPHLHGHDDGDNSMSVIPIVGIGGLGKTTLAKSVFNDKRVDQLFQLKMWACASDDFDIKKIIIQIINSATVSFLTSSSTPSSCLAHQESVNNLEIVQLVNRLRLKVLGQKILVVLDDVWNVDRAKWLELKDLIKVGAPGSKIIVTTRSNSIASMMGDVPFYVLEGLSPKDCLSLFVKWAFKEDEEKKNPNLLKIGNEMVKKCQGVPLAVRTLASSLFSNFDISKWGNVRDSEVWNLEQKQDDILPALKLSYDQMSSDLRHCFAYFSLYPKDYSFNSYDMCNHWVALGLVQCLDESETLELVTLPGWIACAKDTLETLVISNLPRLNMLPVFLTTMTCLKRLYITNCFHLLSFTSDIRRLTALEDLHIKGCPFLCSRCEPLYGDYWPMIRDIKTVFIGKVTKEEEELPGYPF 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03329 592 Pfam Rx N-terminal domain 11 97 IPR041118 -
Tsu07g03329 592 Gene3D Ribonuclease Inhibitor 464 568 IPR032675 -
Tsu07g03329 592 CDD RX-CC_like 6 133 IPR038005 -
Tsu07g03329 592 Gene3D - 10 129 - -
Tsu07g03329 592 Pfam NB-ARC domain 191 433 IPR002182 GO:0043531
Tsu07g03329 592 PANTHER OS08G0543100 PROTEIN 33 477 - -
Tsu07g03329 592 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 445 IPR027417 -
Tsu07g03329 592 Gene3D - 151 339 IPR027417 -
Tsu07g03329 592 PRINTS Disease resistance protein signature 286 300 - -
Tsu07g03329 592 PRINTS Disease resistance protein signature 197 212 - -
Tsu07g03329 592 PRINTS Disease resistance protein signature 538 554 - -
Tsu07g03329 592 PRINTS Disease resistance protein signature 383 397 - -
Tsu07g03329 592 SUPERFAMILY L domain-like 452 574 - -
Tsu07g03329 592 Gene3D - 346 436 IPR042197 -
Tsu07g03329 592 PANTHER DISEASE RESISTANCE PROTEIN RP 33 477 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03329 Tsu-Chr7 39682518 39685146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03329 198 469 WRKY Transcription Factor Family AT5G45050 24.742 5.21e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03329 - - mtr:MTR_7g091140 708.753