Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03327 ATGGCAGACCTTTTCGTTGCTGATATTACTGCGTCACTCATAAGGAAGCTTGCTTCTGCTGCTTATGAAGAAGCTTCTAAAGCCTATGGTGTGTATGAAGAACTACAAGGGTTCAAAGACACTTTGTCGATTGTCAGTGCTGTGTTGTTGGATGCTGAGGAAAAGAAAAACCAACAACATGCCTTGCATGAATGGCTAAGACAGATTCAAAACATCTGCTTTGACGCTGAAGATGTATTGGATGAATTTGAGCTGCAAGACAGGCAAAAGGAAATTGAGAAAGCATCTGGAAGCACACGAGTGAAGGTACGCCACTTCTTTTCTTCCTCAAATCAATTTACTTTCCGATTAAAGAtggcaaaaaaaatcaaagggaTTAAGGATAGGTTGAATAAGGTGGAGGCTGATGGGGCTAGGTATGGTCTTAAAAGTGTTGAACCCGGACTTGTTGTGCAACAAATTAGAGAAATGACATATCCTGATATTGATGCTTCAAGTGTAATAGGAAGGGAAAATGATAGGGATGAAATTATCAATCTTTTGATGCAGCCACATCCTCACGGAGATGATGATGGGGATAAAAGCATGTGTGTCATTCCAATTGTGGGAATTGGAGGACTGGGGAAGACCACACTTGCAAAGTCGGTGTTCAATGATAAAAGAGTGGATCAACTTTTCCAGCTAAAGATGTGGGGGTGTGTTTCTGATGATTTCgacataaaaaagataatcATTCAAATCATCAACTCTGCCACCGCTTCCTTTTTAACTTCATCTTCCACACCATCAAGTTGTCTTGCTAACCAAGAAAACATCAACAACTTAGATATTGTGCAACTAGTAAGTCGTCTGAGACGAAAAGTTTTTGGTCAAAAGTTTTTAGTTGTGCTAGATGACGTATGGAATGATGATCGTGAAAAGTGGCTTGAAttgaaagatttgattaaaGTTGGCGCACCAGGAAGCAAAATTATAGTGACAACACGTCATAACTCAATTGCTTCGATGATGGGTGATGTTCCTTCTTATGTTGTGGAAGGTCTTTCTCCAGAGGATTGTTTATCTCTATTTGTCAAATGGGCATTCAAGGAAGgcgaagaaaaaaaatatccaaatcTAATGGAGATCGGAAATGAAATTGTGCAAAAATGCCAAGGTGTTCCACTAGCTGTAAGAACATTAGCAAGGTCTCTCTTCTCCAAATTTGATATAAGTAAGTGGGAACATGTCAGAGACTCGGAGATGTGgaatttaaaacaaaagaaaaatgatattttacctGCGCTAAAATTAAGCTATGATCAAATGCCAACATATCTGAGACAATGTTTTGCTTATTTTTCCCTTTATCCCAAAGGTTATATCTTCAGTAGTTATGAAATGTGTAGTCATTGGATAGCCCTTGGATTAGTTCACTGCCCTAATGAAAGTGAAACGCTAGAGAGTATTGCAAGAAATTATATTGATGAGTTGCATTCAAGATCATTTATAGTGGATGTACTTGACTATGGCTTCATTTGTCATTTTAAAGTACATGATTTGATATATGATCTTGCATTGTATGTTGCAAAAGAGGACTTTGCAGTGGTAGACTCGCATACTCGGTATATACCTCAGCAAGTAAGGCATTTATCACTTCTTGAAAAGGAGTCAAATGACCATGCTTTGTTCCCAAAGTCTAGAAGTGTAAGAACTATACTATTTCCAACCATGGGATTGGGTCTTGAAAGTGAAAGTGTTCTAGATACATGGGTGTCCAGATACAAATACTTGCGTTATTTAAATTTAACAGATTCTTCATTTGAAACTATGTCcaaatcaatttcaaaattagAACACCTACGTTTTCTCGATCTTTCTCGTAATGACAAAATCAAAACACTACCCAATTCCATTTGCAAACTCCTACATTTACAAGCATTAGTTCTTAGTAGATGCACCATGCTTGAAAAGTTGCCTAAAGGATTAGGCAAGCTAATCAGCCTTCGACATCTTACTATAACCACGAAACAATCTGTTCTGCCACTTGATGAATTTGAAAACTTGATCCATCTTCAAACTTTGAGTTTTCATTTTTGTGACAACTTAAAGTTTTTGTTCAAAACAAAACTCCCTTCCATTAGAGGATTGTATTTTGAATCATGTGGTTGCCTAGAGTCCTTACCTCTAAATATTTTCCCCAAATTACAGACTTTGTACATTAACAACTGTGACAAGTTAAACCTGTTGTTGAACAACGAATGTCCAGAACAAACATTGAGGTTGAAACATTTGTATCTTATTGGATTCTCAAAGCTTGTGACATTACCTGATTGGATTGTATGTGCCATGGATACTTTAGAGACCTTGGTAATCAGTAATTTATCTGGTCTTAAGATGCTTCCAGTGTTTCTAACTACAATGACTTGTCTTAAGAGGCTCTACATAACTAACTGTTTTCAACTCTTGAGTTTTACAAGTGACATGCGTCGCCTCACCGCCCTTGAAGATTTGCGCATAAAAGGTGTTCCTGTGTTGTGCAGCAAATGTCAGCCCCTATATGGTGAGTACTGGCCCATGATTTCTCACATCAAAGCTATTTTCATTGGAAAAGTAACAATAGAGGAGGAGGAGTTACTAGGAGCAGAGAGTAACAATCTCTACAGCTTACAAGTCTCTGGTTTGGCAAACACGAAAACTGTTACCATTCAGCCTGCTGGTAAAGATCAGTTTGTGTTGTTGGCTACAACAAAGGCAAGGAAGCGGAACAAGCCTTCTATTTTGACTCTCAAATCAATCATGAAGGAGTTCTTGCAAGGCTCAGTGCAGTTCACAGAAGCCTCGAAGTTGCCAAGTCTGGTGTCCAGAAGAAGAATAAACAAGCTTTGA 2868 0.3696 MADLFVADITASLIRKLASAAYEEASKAYGVYEELQGFKDTLSIVSAVLLDAEEKKNQQHALHEWLRQIQNICFDAEDVLDEFELQDRQKEIEKASGSTRVKVRHFFSSSNQFTFRLKMAKKIKGIKDRLNKVEADGARYGLKSVEPGLVVQQIREMTYPDIDASSVIGRENDRDEIINLLMQPHPHGDDDGDKSMCVIPIVGIGGLGKTTLAKSVFNDKRVDQLFQLKMWGCVSDDFDIKKIIIQIINSATASFLTSSSTPSSCLANQENINNLDIVQLVSRLRRKVFGQKFLVVLDDVWNDDREKWLELKDLIKVGAPGSKIIVTTRHNSIASMMGDVPSYVVEGLSPEDCLSLFVKWAFKEGEEKKYPNLMEIGNEIVQKCQGVPLAVRTLARSLFSKFDISKWEHVRDSEMWNLKQKKNDILPALKLSYDQMPTYLRQCFAYFSLYPKGYIFSSYEMCSHWIALGLVHCPNESETLESIARNYIDELHSRSFIVDVLDYGFICHFKVHDLIYDLALYVAKEDFAVVDSHTRYIPQQVRHLSLLEKESNDHALFPKSRSVRTILFPTMGLGLESESVLDTWVSRYKYLRYLNLTDSSFETMSKSISKLEHLRFLDLSRNDKIKTLPNSICKLLHLQALVLSRCTMLEKLPKGLGKLISLRHLTITTKQSVLPLDEFENLIHLQTLSFHFCDNLKFLFKTKLPSIRGLYFESCGCLESLPLNIFPKLQTLYINNCDKLNLLLNNECPEQTLRLKHLYLIGFSKLVTLPDWIVCAMDTLETLVISNLSGLKMLPVFLTTMTCLKRLYITNCFQLLSFTSDMRRLTALEDLRIKGVPVLCSKCQPLYGEYWPMISHIKAIFIGKVTIEEEELLGAESNNLYSLQVSGLANTKTVTIQPAGKDQFVLLATTKARKRNKPSILTLKSIMKEFLQGSVQFTEASKLPSLVSRRRINKL 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03327 955 PANTHER DISEASE RESISTANCE PROTEIN RP 7 785 IPR044974 GO:0006952
Tsu07g03327 955 SUPERFAMILY L domain-like 510 862 - -
Tsu07g03327 955 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 7 785 - -
Tsu07g03327 955 CDD RX-CC_like 12 133 IPR038005 -
Tsu07g03327 955 Gene3D - 432 521 IPR036388 -
Tsu07g03327 955 Gene3D - 10 124 - -
Tsu07g03327 955 Gene3D Ribonuclease Inhibitor 747 846 IPR032675 -
Tsu07g03327 955 Pfam NB-ARC domain 192 434 IPR002182 GO:0043531
Tsu07g03327 955 Pfam Rx N-terminal domain 11 97 IPR041118 -
Tsu07g03327 955 Gene3D - 150 341 IPR027417 -
Tsu07g03327 955 Gene3D - 347 431 IPR042197 -
Tsu07g03327 955 Gene3D - 851 954 - -
Tsu07g03327 955 PRINTS Disease resistance protein signature 198 213 - -
Tsu07g03327 955 PRINTS Disease resistance protein signature 384 398 - -
Tsu07g03327 955 PRINTS Disease resistance protein signature 287 301 - -
Tsu07g03327 955 PRINTS Disease resistance protein signature 609 625 - -
Tsu07g03327 955 Gene3D Ribonuclease Inhibitor 571 743 IPR032675 -
Tsu07g03327 955 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 446 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03327 Tsu-Chr7 39666405 39670358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03327 876 943 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 52.113 3.29e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03327 - - mtr:MTR_7g091140 1224.92