Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03325 ATGGCAGAATCATTTCTTTTTGATATTGCTAATTCACTCCTAGGGAAGCTTGCTTCTTATGCTTATGAAGAAGTTTCTCGAGCCTATGGTGTGTATGACGATCTACAAGGTTTCAAAGACACTTTGTCGATTGTCAGTGGCGTGTTGTTCGATGCCGAGGAAAAGAAAAACCAACAGCATGCCTTGCATGAATGGCTAAGGCAGATTCAAAACATCTGCTTTGAGGCTGAAGATGTGTTGGATGAATTTGAGTTGCTAGACAAGCAAAAGGAAGTTGAGAAAGCTTCTGGAAGCACACGAGTGAAGGTACGCCACTTCTTTTCTACCTCTAATTCAGTTTTTTTCCGTCCTAAGATGGCAGAACAAATCAAAGGGATTAGGGATAGGTTGGATAAGGTGGCAGCTGATCGGGTCAGGTTTGGTCTTACAAGTGTTGATCCCGGACTTGTTGTGCAACAAAGAGAAATGACATATCCTGATATTGATGCTTCAAGTGTAATAGGAAGGGAAGATGACAAAGATGAAATTATCAATCTTTTGATGCAGACACATCTTCACTGTGATTATGATGGTGGTGATAAAAGTATGAGTGTCATTCCAATAGTGGGAATTGGAGGATTGGGGAAGACCACACTTGCAAAATCAGTTTTCAATGATAAGAGAGTGGATCAACTTTTCCAGTTAAAGATGTGGGTGTGCGTCTCTAATGATTTCgacataaaaaagataatcATTCAAATGATCAACTCTGCCACCGTTTCCTTTTTAACTTCATCTTCCACACCATCAAGTAGTCTTGCTCACCATGAAAACATCAACAACTTAGATATTGTGCAACTAGTAAGTCGTCTGAGACTAAAAGTTTTTGGTCAAAAGTTTTTAGTTGTATTAGATGACGTATGGAACGATAATCGTGCAAAGTGGCTtgagttgaaagatttgataaaaGTTGGCGCACCAGGAAGCAAAATTATAGTGACAACACGTAGTAACTCAATTGCTTCGATGATGGGTGATGTTCCTTTGTGTGTTTTGGAAGGTCTTTCTCCAGAGGATTGTTTATCTTTATTTGTCAAATGGGCATTCAAGGAAGgcgaagaaaaaaaatatccaaatcTAGTGGAGATCGGAAATGAAATTGTGAAAAAATGTCAAGGGGTTCCACTAGCTGTGAGAACATTAGGAAGTTCTCTCTTCTCAAACGTTGATATAAGTAAGTGGGAATGTGTCAGAGACTCGGAGATGTGGAATTTAAAACAGAAGCAAGATGATATTTTACCTGCACTGAAATTAAGCTATGATCAAATGCCAACCTACTTGAGGCACTGTTTTGCTTATTTTTCCCTATATCCCAGAGATTATATCTTCAATAGTTATGAAATGTGTAGTCATTGGGTAGCCCTTGGATTAGTTCACTGCCTTAATGAAACTGAAACGCTAGAGGGTATTGCAAGAAATTATATTGATGAGTTGCATTCAAGATCATTTATTACGGATGTAATTGACTATGGCTTCATTTGTCATTTCAAAGTACATGATTTGATATATGATCTTGCATTGTATATTGCAAGAGAGGATTTTGCAGTAGTAAAATCGCATACTCAGAATATACCTCAGCAGGTAAGGCATTTATCATTTGTTGAAAATGAGTCAAATGACCATGTTTTGTCTCCAAAGTCTAGAAGTGTGAGAAGTATACTATTTCCAACCATGGGATTGGGTCTTGAAAGTGAAAGTGTTCTAGATACATGGGTGTCCAGATACAAGTACTTGCGTTATTTAAATTTAAGTGATTCTTCATTTGAAACTATGaccaattcaatttcaaaattagAACACCTACGTTTTCTCGATCTTTCTCGTAATGACAAAATCAAATCTCTTCCAAATTCCATTTGCAAACTCCTACATTTACAAGTATTGCTTCTCAGTGGGTGCACCATGCTTGAAAATTTGCCTGCAGGATTATGCAAGCTAATCAGCCTTCGACATCTTACTATAACCACAAAACAATCTGTTCTGCCACTTGATGAATTTGAAAACTTGATCCATCTTCAAACTTTGAGTTTTCATTTTTGTGACAACTTAAAGTTTTTGTTCAGAAAACAACTCCCTTCCATTAGAGAATTGTATTTTGAATCATGTGGTTGCCTAGAGTCCTTACCTCTAAATATTTTCCCCAAATTACAGACTTTGTACATTAACAACTGTGACAATTTAAACCTGTTGTTGAACAACGAATGTCCAGAACAAACATTGAGGATCAAACATTTGTATCTTATTGGTTTCTCAAAGCTTGTGACATTACCTGGATGGATTGAATGTGCTATGGATACTTTAGAGACCTTGGTAATCAGTAATTTACCTAATCTTGATATGCTTCCAGTGTTTCTAACTACAATGACTCGTCTTAAGAGGCTCTACATAACTAACTGTTTTCAACTCTTGAGTTTTACAAGTGACATGCGTCGCCTCACCGCCCTTGAAAATTTGCGCATAAAAGGTTGTCCTGTGTTGTGCAGCAGATGTCAGCCCCTATATGGTGAGTACTGGCCCATGATTTCTCACATCAAAACTGTTTTCATTGGAAAAGTAACAatagaggaggaggaggagttACTAGATGATGAAGTTGTGAAAAGACATATGCAGCTTGAAGAGTCACAAGAAAAAGCAAAGCAGTAG 2685 0.3631 MAESFLFDIANSLLGKLASYAYEEVSRAYGVYDDLQGFKDTLSIVSGVLFDAEEKKNQQHALHEWLRQIQNICFEAEDVLDEFELLDKQKEVEKASGSTRVKVRHFFSTSNSVFFRPKMAEQIKGIRDRLDKVAADRVRFGLTSVDPGLVVQQREMTYPDIDASSVIGREDDKDEIINLLMQTHLHCDYDGGDKSMSVIPIVGIGGLGKTTLAKSVFNDKRVDQLFQLKMWVCVSNDFDIKKIIIQMINSATVSFLTSSSTPSSSLAHHENINNLDIVQLVSRLRLKVFGQKFLVVLDDVWNDNRAKWLELKDLIKVGAPGSKIIVTTRSNSIASMMGDVPLCVLEGLSPEDCLSLFVKWAFKEGEEKKYPNLVEIGNEIVKKCQGVPLAVRTLGSSLFSNVDISKWECVRDSEMWNLKQKQDDILPALKLSYDQMPTYLRHCFAYFSLYPRDYIFNSYEMCSHWVALGLVHCLNETETLEGIARNYIDELHSRSFITDVIDYGFICHFKVHDLIYDLALYIAREDFAVVKSHTQNIPQQVRHLSFVENESNDHVLSPKSRSVRSILFPTMGLGLESESVLDTWVSRYKYLRYLNLSDSSFETMTNSISKLEHLRFLDLSRNDKIKSLPNSICKLLHLQVLLLSGCTMLENLPAGLCKLISLRHLTITTKQSVLPLDEFENLIHLQTLSFHFCDNLKFLFRKQLPSIRELYFESCGCLESLPLNIFPKLQTLYINNCDNLNLLLNNECPEQTLRIKHLYLIGFSKLVTLPGWIECAMDTLETLVISNLPNLDMLPVFLTTMTRLKRLYITNCFQLLSFTSDMRRLTALENLRIKGCPVLCSRCQPLYGEYWPMISHIKTVFIGKVTIEEEEELLDDEVVKRHMQLEESQEKAKQ 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03325 894 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 446 IPR027417 -
Tsu07g03325 894 CDD RX-CC_like 2 134 IPR038005 -
Tsu07g03325 894 Gene3D - 347 431 IPR042197 -
Tsu07g03325 894 Pfam Rx N-terminal domain 11 97 IPR041118 -
Tsu07g03325 894 PRINTS Disease resistance protein signature 609 625 - -
Tsu07g03325 894 PRINTS Disease resistance protein signature 287 301 - -
Tsu07g03325 894 PRINTS Disease resistance protein signature 384 398 - -
Tsu07g03325 894 PRINTS Disease resistance protein signature 198 213 - -
Tsu07g03325 894 SUPERFAMILY L domain-like 510 865 - -
Tsu07g03325 894 Gene3D - 153 340 IPR027417 -
Tsu07g03325 894 ProSiteProfiles Leucine-rich repeat profile. 613 635 IPR001611 GO:0005515
Tsu07g03325 894 PANTHER DISEASE RESISTANCE PROTEIN RP 6 792 IPR044974 GO:0006952
Tsu07g03325 894 Gene3D - 10 124 - -
Tsu07g03325 894 Gene3D - 432 521 IPR036388 -
Tsu07g03325 894 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 792 - -
Tsu07g03325 894 Pfam NB-ARC domain 192 434 IPR002182 GO:0043531
Tsu07g03325 894 Gene3D Ribonuclease Inhibitor 559 848 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03325 Tsu-Chr7 39654613 39657817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03325 199 836 WRKY Transcription Factor Family AT5G45050 22.321 2.32e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03325 - - mtr:MTR_7g091140 1262.28