Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03323 ATGGCAGAATCATTTGCATTTGATATTGCTAATTCACTCTTATGTAAACTTGCTTCTTATGCTTATGAAGAAGCTTCTCGAGCCTATGGTGTGTATAAAGATCTACAAGGGATCAAAGACACTCTCTCAATTGTCAGCGGCGTGCTATTAGATGCCGAGCACAAGAAAGATCAAAAGCACGGGCTACGTGAATGGCTGAGGCAGATTCATAATATATGTTCTGATGCAGAAAATGTATTGGATGGATTTGACTTGCAGCACAAGCGAAAACAAGTCTTGGAAGCTTCTGGAAGCACACGGACGAAGGTATGCCACTTATTTTCTTCCTCTAATCCACTTGCATTCCGTTTTAGAATGGCGCGtcaaattaaagatattagagATAGATTGAATAAGGTGGCAGCTGATGGGACCATGTTTGGACTTGTAACCATCAATGTCGATCCCGGATTTGTTGtacaaaagagagaaatgaCTTATCCCCATGTTGATGTTTCGAGTGTCATAGGAAGAGAGAGTGATAGGGAAGAAATTATCAAGCTTTTAATAAAACCACATCCTCAAGGTGATGGTGATGGTGATAAAAGATTGTGTGTTATTCCCATTGTGGGAATTGGTGGCTTGGGGAAAACCACGCTTGCAAAGCTTGTGTTTAACGATAACAGGATGGATAAACTTTTTCAGTTGAAGATGTGGGTTTGTGTCTCTGTTGATTTTGACATCAATCAGATAATAGTTAAAATCATAAACTctatccaaaaaattaaaatcattaacTCTGCCAATACTTCcactttttcttcatcttccgCGTCAATGACTAGTTTTGATCACCAAGAAAACATAAACAACTTAGATATGGTGCAACTAGTAAGTCTTCTGATAAAAAAACTTTATGGTAAAAAGTTTTTACTCGTGTTAGATGACGTATGGAATGAAGATCGTGCAAAGTGGATtgagttgaaagatttgataaaaGTTTGTGCGTCAGGAAGCAAAATTGTGGTGACAACACGTAGTAAATCCATTGCTTCGATGATGGGTAATGTTCCTGCGTATATTTTGAAAGGCCTTTCTCGAAAGAATTGTTTAGCTTTGTTTGTCCAATGGGCGTTCAAGGAAggtgaagaagaaagatatCCAAATCTAGTAGAGATCGGAAAAGAAATTGTGAAAAAATGCCAAGGGGTTCCGTTAGCTGTGAGAACATTAGGAAGTTCCCTCTTCTCAAACTTCGATTTAAGTAAGTGGGAATTTGTTAGAGACTCCAAGATATGGAATTTAGAACAAAAGAAAGATGGCATTTTATCTGCACTAAAATTAAGTTATGATCAAATGTCATCCTATTTGAGacaatgttttgtttgtttttcccTTTTTCCAAAAGATCATATTTTCAATAGTGATGTAATGTGCAGTCTTTGGGTAGCCCTTGGATTAGTCCAATCCCTAAACGGAAGTGAGAAGTTAGAGAGTATTGCAAGAGAATATATAGATGAGTTGCATTCAAGATCGTTTCTTCAGGATGTCAATGACTATGGGTCCTATTGCGAGTTCAAAGTACATGATTTGATACATGATCTTGCATTGTATTTTGCAAGAGAGGACTTTGTAGCGATAGACTCGCATACTCAAAATATACCTCAGCAAGTAAGGCATTTATCGGTTATTGAAAATGATTCACTTGACCATGGTTTGTTTCCGAAGTCTAGAAGTTTGAGAACTATACTATTTCCCAACCTCGGAGTGGGTCTTGCAAGTGAAAGTGTTCTAGATACATGGTTATCAAGATACAAATACTTGCGTTATTTAAATTTAAGTGATTCTTCATTTGATACTATGTCAAATTCAATTACAAAATTAGACCATTTGCGTTTTCTTGATCTCTCTcgtaataagaaaatcaaaagactTCCAAATTCCATTTGCAAACTCCTAAATTTGCAAGTTTTGTCGGTCAGCGGTTGCACGGAGCTTGAAAAAATGCCTAAAGGATTAGGCAAGCTAATCAGCCTTCAACGTCTTACTATAACCACAAAACAATCTGTTCTGCCGCAGGGTGAATTTGAAAGAGCATTTTCTTTAATGAACCAGGAGGAGAGACGAAGGAATGAAATCATCAACCTTGAagACAAGGTAGATGATAAAATTGGAGTGGAAAAAGGATATTCAGCTTGA 2178 0.3489 MAESFAFDIANSLLCKLASYAYEEASRAYGVYKDLQGIKDTLSIVSGVLLDAEHKKDQKHGLREWLRQIHNICSDAENVLDGFDLQHKRKQVLEASGSTRTKVCHLFSSSNPLAFRFRMARQIKDIRDRLNKVAADGTMFGLVTINVDPGFVVQKREMTYPHVDVSSVIGRESDREEIIKLLIKPHPQGDGDGDKRLCVIPIVGIGGLGKTTLAKLVFNDNRMDKLFQLKMWVCVSVDFDINQIIVKIINSIQKIKIINSANTSTFSSSSASMTSFDHQENINNLDMVQLVSLLIKKLYGKKFLLVLDDVWNEDRAKWIELKDLIKVCASGSKIVVTTRSKSIASMMGNVPAYILKGLSRKNCLALFVQWAFKEGEEERYPNLVEIGKEIVKKCQGVPLAVRTLGSSLFSNFDLSKWEFVRDSKIWNLEQKKDGILSALKLSYDQMSSYLRQCFVCFSLFPKDHIFNSDVMCSLWVALGLVQSLNGSEKLESIAREYIDELHSRSFLQDVNDYGSYCEFKVHDLIHDLALYFAREDFVAIDSHTQNIPQQVRHLSVIENDSLDHGLFPKSRSLRTILFPNLGVGLASESVLDTWLSRYKYLRYLNLSDSSFDTMSNSITKLDHLRFLDLSRNKKIKRLPNSICKLLNLQVLSVSGCTELEKMPKGLGKLISLQRLTITTKQSVLPQGEFERAFSLMNQEERRRNEIINLEDKVDDKIGVEKGYSA 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03323 725 Pfam Rx N-terminal domain 11 98 IPR041118 -
Tsu07g03323 725 CDD RX-CC_like 2 134 IPR038005 -
Tsu07g03323 725 PANTHER DISEASE RESISTANCE PROTEIN RP 6 711 IPR044974 GO:0006952
Tsu07g03323 725 PRINTS Disease resistance protein signature 199 214 - -
Tsu07g03323 725 PRINTS Disease resistance protein signature 394 408 - -
Tsu07g03323 725 PRINTS Disease resistance protein signature 619 635 - -
Tsu07g03323 725 Gene3D Ribonuclease Inhibitor 533 692 IPR032675 -
Tsu07g03323 725 Gene3D - 154 351 IPR027417 -
Tsu07g03323 725 SUPERFAMILY L domain-like 520 679 - -
Tsu07g03323 725 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 711 - -
Tsu07g03323 725 Pfam NB-ARC domain 194 444 IPR002182 GO:0043531
Tsu07g03323 725 Gene3D - 448 530 IPR036388 -
Tsu07g03323 725 Gene3D - 357 447 IPR042197 -
Tsu07g03323 725 Gene3D - 10 124 - -
Tsu07g03323 725 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 456 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03323 Tsu-Chr7 39649454 39652366 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03323 200 678 WRKY Transcription Factor Family AT5G45050 22.457 2.70e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03323 - - mtr:MTR_7g091140 1010.75