Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03296 ATGGCGAGCGATTCTCGATCATGGAAATTTCACGTGTTCTTAAGTTTCAGAGGAGAAGAAACTCGCAACAAATTCACGGATCATCTCTACACAGCGTTTAAATCAAACGGCTTAACTGTTTTCAAAGACGACATAGAACTTCAAAGAGGTGAAATTATTGCTCCAGAGCTTCTCAATGCGATCGATCAATCACTCTCTTCCGTGGTGATTCTTTCTCCTGACTATGCTTCTTCACGGTGGTGCTTGGATGAGTTAGTTACCATTCTCCGATCTAGAATTCAATTGGGTCATTTTGTTTTCCCTGTCTTCTACGATGTGGATCCAACTGATGTGAGACACCAGCGAGGGTCTTTTGCAGAGGCTTTTGTTAAGCATGGTGAAAGGTTTGGTGATGACAGTGAAAAGATTCAGAAGTGGAGGGAGGCTTTGACTCAGGTTGCAGAGTTGTCTGGCTGGAGCTCCAAGGGAAGGCGTGAAACAGAACTCATTGAAGAAATTGTAGCAGAAGTATGGAAAAGGATACAACCTAAATTGCCACATTATGATGATGAACTGGTTGGAATTGATTCTAGGATAAACAACATGTGCTCACTTTTAAGGACAGAGTCTGAGGAAATTTACTTTGCGGGAATATGGGGTATGGGCGGCATAGGAAAGACAACTCTAGCCAAACTTGTCTACAATAAAATCCATAACCAGTTTGATTTTAGTTGCTTTCTTGAGAATGTTAGAGAGATTTCTAGTGAAAGAGATGGTTTGCTTTGTTTACAAAGAAAGTTGCTTTCTCATCTAAAATTAAGCAGCCTGAGAATTGAAAGTTTGGACCAAGGAAGGGAGACAATACGGAAtcttttattcaataaaaaagttCTCCTTGTCCTTGATGACCTAAGTTCTGATATCCAACTAGAGAATTTAGCTGGAAAAGAAGAATGGTTTGGTCCAAAGAGCAAGGTAATAATAACAACTAGAGACAATCATCTCCTAGTATCACTAGGCGTGTGTCAAACTTATGATGCTCAAATCTTAAACAGTGATGAATCCCTTCaacttttttgtcaaaaagcTTTTAGAAGAGGAAAACCTGAAGATGGTTTCATAGAGTTGTCAAAACAGGTGGTTGAATGCACTGGAGGTATTCCCTTGGCACTCAAAGTGTTGGGTTCATTCCTCTGTGGAAGGAGGGCATCTGTATGGGAAGACGCTTTGAAAATGTTGCAGCAGGATCTGCAAAATGATATTTACAAGACATTGAGAATAAGTTATGATGGATTAAGGGATATGGAAAAGGCGATATTTCTAGATATTGCTTGTTTTTTCAAAGGGAGCCTCAAAGATCATGTAACACAAATATTGAAAAATTGCGGTCTTAATCCATTGATTGGTATAGACGTTCTTATTGAAAAATCATTAATAACGTATGATGGGTGGAATTTGGGGATGCACGATTTGCTTCAAGAAATGGGTAGAAATATTGTTCTACATGAATCTCTTAATGATGCCGGCAAGCGGAGTAGGTTGTGGTCTGTCAAGGACATTGATCAAGTATTGAGAAATAATAAGGGGACTGAATCCACTCAAGCTGTAGTTCTAAATCTGTCTGAAGCATTTGAAGCAAGTTGGAACCCTGAAGCTTTTGCAAAGACGGGTAATCTTAGATTGCTCATgatattaaataaattgcaacTCCCACTTGGTCTCAAATGTCTTCCCAGTGGGTTAAAAGTTCTTGAATGGAGGGAATGTCCACTCGAGTCATTGCCAGTTGGAGACCAATCGGACGAACTTGTTGACCTTAATATGTGTGATAGCAAAATAAAGTACCTTTGGAGAGGAATGAAGCTTCTTGGAAATTTGAAGACCATCAATTTGAGAAATTCCAAATATCTACAACAAACTCCAGACTTCACTGGAATTCCAAATCTTGAAAAATTGGATCTTGAAGGCTGCATAAACCTAGTTAAGGTTCATGATTCTCTTGGACTTCTTAAAAAGCTTTCATATGTGACATTAGAAGATTGCAGAAATCTTAAAAGCCTTCCGGGAGAATTGGAAATGAATTCTCTGAAGTGTCTTATTCTATCAGGCTGCACAGCAGTAAGAAAGCTTCCTGATTTTGGGGAAAGTATGACAAATCTATTCACACTTGCTTTGGAAGAGACTCCCATAGCTCAACTACCTCCAACTATTGGTTACTTGACAGGTCTTAATAGCTTGCGTTTACGGGAATGTAGAAATATTGTTTCCCTTCCAAATACTTTTTCTAATTTGAAATCTCTCAAAAGGCTAAATTTATCTGGTTGCTCAAAATTTTACAAGCTTCCTGATAATTTGCATGAAAATGAGGCTTTGGAGTTTCTTAATGTGAGTGACACTGCTATAAGAGAAGTTCCTTCATCCATTGTTCATTTGAAAAATCTTGTATTACTTTCATTTCATGGATGCAAAGGACTATCGAACTCAGAGAGCTCACGCTTCTCGTTGAGTAAGTTTTTCAGGTCTGGTACTGATCCAATTCCCATGAAATTAATCTTGCCTTCTTTTTCTGGTCTATCCTCATTGAAGAAACTAGACTTAAGCTATTGCAATCTCTATGATGGATCAATTCCTGATGATCTTGGCTGCTTATCATCATTGGTAACATTAGATATAAGTGGGAACAAATTTGTGAACCTTCATGATGGCTGCATATCTAAACTTTTGAAGCTAGAAAGACTTGTGTTGAGTAGTTGCCAAAACCTCCAGTCATTGCCCAAGTTACCACCAAATGTACATGTTGTTAATGCAAGTGATTGTGATTCAATGAAACCCTTATCAAATCCACAAGAGATATGGAATCACTTGGCATCTTTTGCTTTTGATAAGTTGCAAGATGCAAATCCGATCAAAACTTTATTGGTAAGTCCTGGAAATGAAATTCCATCAACGTTTttctatcaaaattattttgacagGGACATacaatatttaaaagataactacATATGGGCTGATTCTACTGCATCAATATCGATAAACATAGCTCAACTTCGTCAACGGTATGATAGAAGTGAATGGTGGGGAATTTTGGTTTGCCTTGTCATAGAAGATGTGGTGTCTTCTAAACCTTCCCAGGACTATCGTGTTGGTTGGATTTCAAAATTTCCTGCTACCAATAATATTTTGCGTCAGCTATGTCAAAAGTTGTTGGAGCACGGTTTCATTTCTGGAGTACCAAATTCCAAGCATCCTCACCTATTGGTTTTGTATATTCCTGGTCCTTCATCCCGTTGGTCTTATGTTCAAGACAAGTTTGAGTTGATATTTTTCAGTTCTAGTCTTAAGAGTAAGTTAGTTATAAAGAAATGTGGATGGCGCATATTATGTAAGGAAGATGCACAACTCATGCACAAAAAACTGTCTGAATGCAACACTTCTTCTACCAACCAAAGTATTTCACGAGGAAATTGTTTATCTTCTTCTCCTCCTTCTTTTACATCATATTGGAGATGGATAAGCTGTCTCAAGGTTCCCCGATGTTACAAAACTTTCCTGTTGGAAGTCCTATGTGAACGCTTGCCTACTATTGCTAAATGCAGGTTCTGTAGTATGGAAGGAACTGCCACTATCCATGTTTTACGAGACTGTAGGCGAGCTCGTGCAATTTGGGTTCAAATGGTTCCTCCTCAAGTGCATGATgagtttttttcaatttctcttcATGATTGGATGCATAGGTTCCTTCGTAGGTCCTGGTTGCCAAATAACTGTGAAGAATATGATGCTGATTGCTTGAGGTTTTCTGTCACCACTTTTGTGCTCTGGAAGGACGGAGTTCACGAAGGAGATTCTTTAACATATAATAGGTTGTATTCTTTGATCAAGTCTCTAGTAAAAGAACTCACCTCATCTACCAAACGTTTTATTAAGTTGAACGTGGATGGTTGTTGCATGGACAACCCTAGAAAGGCCGGTTATGGGGGTCTTTTTCGTGATGTGGAGGGGAATTGGCATGGTGGATTCTATGGCTCTCTGGGCTTTACAACTACTATGAAAGCTGAGCTTTATGCCATTTGTCAAGGTTTGGTCACAGCTTGGGATTTGGGTTACAGAAATATATTAGTTGAAACTGATTCCTTGGAAGCTATCAATCACATTGAGGAGGCCAATATTGAGCATGATCTCTATGGTAGCTTGGTTTCTGACATACGCTCGCTCATGCAAAGAAATTGGTCCCTAAATTTGGTCCATTCTGTCAAGGAAGATAATGGTTGTGCAGATATTTTATCGAAACTTGGAGCTGAGCAGCACGAGGTCTATTGCTACCATGCTTATCCACCACAACAGCTTAAGTGGGCATTGAGGGCCGATTCCCTCCATGTTCAACTTCCTTGCATGTAG 4380 0.3831 MASDSRSWKFHVFLSFRGEETRNKFTDHLYTAFKSNGLTVFKDDIELQRGEIIAPELLNAIDQSLSSVVILSPDYASSRWCLDELVTILRSRIQLGHFVFPVFYDVDPTDVRHQRGSFAEAFVKHGERFGDDSEKIQKWREALTQVAELSGWSSKGRRETELIEEIVAEVWKRIQPKLPHYDDELVGIDSRINNMCSLLRTESEEIYFAGIWGMGGIGKTTLAKLVYNKIHNQFDFSCFLENVREISSERDGLLCLQRKLLSHLKLSSLRIESLDQGRETIRNLLFNKKVLLVLDDLSSDIQLENLAGKEEWFGPKSKVIITTRDNHLLVSLGVCQTYDAQILNSDESLQLFCQKAFRRGKPEDGFIELSKQVVECTGGIPLALKVLGSFLCGRRASVWEDALKMLQQDLQNDIYKTLRISYDGLRDMEKAIFLDIACFFKGSLKDHVTQILKNCGLNPLIGIDVLIEKSLITYDGWNLGMHDLLQEMGRNIVLHESLNDAGKRSRLWSVKDIDQVLRNNKGTESTQAVVLNLSEAFEASWNPEAFAKTGNLRLLMILNKLQLPLGLKCLPSGLKVLEWRECPLESLPVGDQSDELVDLNMCDSKIKYLWRGMKLLGNLKTINLRNSKYLQQTPDFTGIPNLEKLDLEGCINLVKVHDSLGLLKKLSYVTLEDCRNLKSLPGELEMNSLKCLILSGCTAVRKLPDFGESMTNLFTLALEETPIAQLPPTIGYLTGLNSLRLRECRNIVSLPNTFSNLKSLKRLNLSGCSKFYKLPDNLHENEALEFLNVSDTAIREVPSSIVHLKNLVLLSFHGCKGLSNSESSRFSLSKFFRSGTDPIPMKLILPSFSGLSSLKKLDLSYCNLYDGSIPDDLGCLSSLVTLDISGNKFVNLHDGCISKLLKLERLVLSSCQNLQSLPKLPPNVHVVNASDCDSMKPLSNPQEIWNHLASFAFDKLQDANPIKTLLVSPGNEIPSTFFYQNYFDRDIQYLKDNYIWADSTASISINIAQLRQRYDRSEWWGILVCLVIEDVVSSKPSQDYRVGWISKFPATNNILRQLCQKLLEHGFISGVPNSKHPHLLVLYIPGPSSRWSYVQDKFELIFFSSSLKSKLVIKKCGWRILCKEDAQLMHKKLSECNTSSTNQSISRGNCLSSSPPSFTSYWRWISCLKVPRCYKTFLLEVLCERLPTIAKCRFCSMEGTATIHVLRDCRRARAIWVQMVPPQVHDEFFSISLHDWMHRFLRRSWLPNNCEEYDADCLRFSVTTFVLWKDGVHEGDSLTYNRLYSLIKSLVKELTSSTKRFIKLNVDGCCMDNPRKAGYGGLFRDVEGNWHGGFYGSLGFTTTMKAELYAICQGLVTAWDLGYRNILVETDSLEAINHIEEANIEHDLYGSLVSDIRSLMQRNWSLNLVHSVKEDNGCADILSKLGAEQHEVYCYHAYPPQQLKWALRADSLHVQLPCM 1459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03296 1459 ProSiteProfiles TIR domain profile. 8 174 IPR000157 GO:0007165
Tsu07g03296 1459 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 7 714 - -
Tsu07g03296 1459 Gene3D - 342 426 IPR042197 -
Tsu07g03296 1459 Gene3D Ribonuclease Inhibitor 709 955 IPR032675 -
Tsu07g03296 1459 Gene3D Ribonuclease Inhibitor 509 708 IPR032675 -
Tsu07g03296 1459 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 714 IPR044974 GO:0006952
Tsu07g03296 1459 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 152 IPR035897 -
Tsu07g03296 1459 SUPERFAMILY "Winged helix" DNA-binding domain 413 517 IPR036390 -
Tsu07g03296 1459 Gene3D - 176 336 IPR027417 -
Tsu07g03296 1459 SMART till_3 9 149 IPR000157 GO:0007165
Tsu07g03296 1459 Pfam Reverse transcriptase-like 1305 1424 IPR002156 GO:0003676|GO:0004523
Tsu07g03296 1459 Gene3D - 3 175 IPR035897 -
Tsu07g03296 1459 CDD RNase_H_like 1304 1424 IPR044730 -
Tsu07g03296 1459 Pfam NB-ARC domain 198 426 IPR002182 GO:0043531
Tsu07g03296 1459 SUPERFAMILY Ribonuclease H-like 1301 1430 IPR012337 -
Tsu07g03296 1459 PRINTS Disease resistance protein signature 755 771 - -
Tsu07g03296 1459 PRINTS Disease resistance protein signature 284 298 - -
Tsu07g03296 1459 PRINTS Disease resistance protein signature 377 391 - -
Tsu07g03296 1459 PRINTS Disease resistance protein signature 208 223 - -
Tsu07g03296 1459 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 711 983 - -
Tsu07g03296 1459 Gene3D - 1301 1429 IPR036397 GO:0003676
Tsu07g03296 1459 ProSiteProfiles RNase H type-1 domain profile. 1298 1428 IPR002156 GO:0003676|GO:0004523
Tsu07g03296 1459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 436 IPR027417 -
Tsu07g03296 1459 SUPERFAMILY L domain-like 530 918 - -
Tsu07g03296 1459 Pfam TIR domain 9 180 IPR000157 GO:0007165
Tsu07g03296 1459 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 711 983 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03296 Tsu-Chr7 39305557 39312265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03296 5 812 WRKY Transcription Factor Family AT4G12020 31.566 9.35e-96 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03296 - - var:108321227 1973.36