Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03295 atGGCGCCAAAAACAAAACACTCCTCAATCTTCATCGGTAACTGCCAAATTACCGTCGAAGCCACCACTTTCAGCTGCAATTCCATTTCCAACGACCTCTTAGTCACTCTCCCTCGAAGCGGAAAGATCAAAATATCtgATGTTTCTGCGAACCATAAAAACGCTTCTGAAAAATTCACTTCTGAAGAAAGAGAACACGAGTTTGTGTTACTTAATCCTAAAGATGTTGATAATATTAGCAAATCATACATTCAGGAAGTATTACAGATGTATATGACAGAGCTACCTGGAATGAATTATGCTGCGAATACTGGAAAGCAATCAAAGTTTCTTGAGAGATGTGTGACTAATGGGAAATATCGAACACTTATTCTGAAATCCAATTCGGCTGGAGATTCGGGAAAGGTTATAGCTGCAATTACTTATCAAATCATCCCTGCAGATACAGAATATGCAGAGATCCCACTTGCAGCTGTCAACGCAATACATCAACGGAAGGGTATTGGTCATCTGTTGTTTCTAGAGCTACGGAAGAGACTTGAAAATGTTGGCATTCGCTCCATTTTTTGTTGGGGAGACAAAGAATCTGAAGGATTTTGGCTTAAACAGGGTTTTTCATCAATAGCACAGGTGGATACAAAAGGTAGGGCCCGAAGGTTACCTGTAAAAGCTGATATTCGCAAAGCATTATGCTTTCCTGGTGGTTCGACTCTCATGGTTTTACACCTAAGGAAAGAATTGTTGGATGACAATTCTAACTCTGGGAAGTGTCTCCCCTCACAGCCTCATCAGAATTCCTTTACACCTGCAATTGTTGAAAATGAGTTGCCTGAATCCTCAGAGGAACTACTCATTAATTTGAAATCATCCCGTAGAACAGAAACAGACAAAGGTCAAAGTAAGCCTAAGGCTTTGGTAAAAGTTGGATCTTCACGAGGACATGGAAAACTCGGTGGATTTGACAGTCAGAATCCTAAGAACTACTGCAATGACACTGTTGCTTCTGCCAGAGCAAATGATGATAGACAAGCAAATGGTGCAGATTGTTCCCAGGATGGAAATTATGCTAATGTAGCGAATTGTTCTCAATCTACAAAAGTTGCAAAGAGGGCCTGGGAAGCCTCTTCATCCTCGTTGAAATCAAAGAGAGTGAGGGGAAGCCAGATAGCTGACTGTCATTCAGATTCTAGCTGGGGTTTTGTCTCAGAGGCTGATAGGACCAATCCTTGTTCTTTGGAAGCCCCTCATTGCAATACTGCAATTACAAAGAACTCAACAGAATGTATTAGAGACCATATGCATGTAGAAGCTCCCATCAGCCCAAAACTGCCATCAACTAAACAATGCTTTAGAATCATGTTGATGAATATCACTGATGATGCTAAGAAAACACAGCTTGCAAAGGTGATTGAAGACCTTGGTGGCACTAATGCCTCTGATGGAAGCACAACCACACATGTTGTCACAGGACAAGTGAGAAAAACTATGAATTTCTGTACCGCACTCTGTTCTGGTGCTTGGGTGGTCTCATCAAGTTGGTTAAAAGAAAGTTTTCGTAAAGGCAAATTTGTTGATGAATCACCTCACATTCTGAATGATAAGGATTATTTGTTGAAGTATAATTCGGATTTAAGAAGTGCAGTTTTCCGAGCAAAAGCTTGTCCCCGTGCTTTGTTTAAGGGGTATAATATATGTATTGCAGCTAATGTTCGAACTTCTGCAAAAACTCTGTCTGCTATTGTTAGATCAGCTGGTGGTAATGTGATTAGTGGACTCGAAAAAGTAAATGAAGCATCAACAACAATCTTTGTGACTTGTGAAGAAGatattgaagaagctattatGGCTTCAAAGAAAGGTATAAGGACTTTCAGCAGTGAGTGGTTTATGAACTGTGTCATGAGACAAGAGCTTGACTTGGAAGCCCCACAATGTGTACAGTCCTTATGA 1950 0.4026 MAPKTKHSSIFIGNCQITVEATTFSCNSISNDLLVTLPRSGKIKISDVSANHKNASEKFTSEEREHEFVLLNPKDVDNISKSYIQEVLQMYMTELPGMNYAANTGKQSKFLERCVTNGKYRTLILKSNSAGDSGKVIAAITYQIIPADTEYAEIPLAAVNAIHQRKGIGHLLFLELRKRLENVGIRSIFCWGDKESEGFWLKQGFSSIAQVDTKGRARRLPVKADIRKALCFPGGSTLMVLHLRKELLDDNSNSGKCLPSQPHQNSFTPAIVENELPESSEELLINLKSSRRTETDKGQSKPKALVKVGSSRGHGKLGGFDSQNPKNYCNDTVASARANDDRQANGADCSQDGNYANVANCSQSTKVAKRAWEASSSSLKSKRVRGSQIADCHSDSSWGFVSEADRTNPCSLEAPHCNTAITKNSTECIRDHMHVEAPISPKLPSTKQCFRIMLMNITDDAKKTQLAKVIEDLGGTNASDGSTTTHVVTGQVRKTMNFCTALCSGAWVVSSSWLKESFRKGKFVDESPHILNDKDYLLKYNSDLRSAVFRAKACPRALFKGYNICIAANVRTSAKTLSAIVRSAGGNVISGLEKVNEASTTIFVTCEEDIEEAIMASKKGIRTFSSEWFMNCVMRQELDLEAPQCVQSL 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03295 649 CDD BRCT_PAXIP1_rpt6_like 558 639 - -
Tsu07g03295 649 MobiDBLite consensus disorder prediction 289 322 - -
Tsu07g03295 649 CDD NAT_SF 132 191 - -
Tsu07g03295 649 ProSiteProfiles BRCT domain profile. 554 638 IPR001357 -
Tsu07g03295 649 Pfam Acetyltransferase (GNAT) family 130 205 IPR000182 GO:0016407
Tsu07g03295 649 Gene3D BRCT domain 556 647 IPR036420 -
Tsu07g03295 649 Gene3D - 65 219 - -
Tsu07g03295 649 PANTHER N-ACETYLTRANSFERASE 4 649 - -
Tsu07g03295 649 ProSiteProfiles BRCT domain profile. 452 531 IPR001357 -
Tsu07g03295 649 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 74 227 IPR000182 GO:0016407
Tsu07g03295 649 Pfam BRCA1 C Terminus (BRCT) domain 459 518 IPR001357 -
Tsu07g03295 649 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 4 649 - -
Tsu07g03295 649 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 71 211 IPR016181 -
Tsu07g03295 649 SUPERFAMILY BRCT domain 451 533 IPR036420 -
Tsu07g03295 649 Gene3D BRCT domain 441 555 IPR036420 -
Tsu07g03295 649 SMART BRCT_7 444 521 IPR001357 -
Tsu07g03295 649 SMART BRCT_7 556 636 IPR001357 -
Tsu07g03295 649 SUPERFAMILY BRCT domain 555 638 IPR036420 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Tsu07g03295 Acetyltransf_1 7.2e-06 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03295 - - gmx:100806087 900.582