Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03282 ATGCATAAGTTGCTACAATCTGTACTTGATCGTGTCAAGAAGAACGATGATCTCACTGCGTTCGATCAAGACCCTCTCACACGTTCGATTAGTCTCGAACGACATTGCTGTGGAGAATTTTCTATGGCTAATGTTCAAGCCAATTCAAGTATGGAAGATCAAAGCCAAGTAGAAGTTGCCTCTAAGAATGCTCTTTATCTTGGAGTTTATGACGGCCATGGTGGCGTCGAAGCATCGTTCCATGTCCTTACTGAACTCTTCAACCATCTATTGAGGATTGCTGACGAGAATGGTGACAACGCTCTAACTGATGCGACTTTGAGGAACGCGGTCGCGGCTACTGAAAATGCCTTCCTGGAATATGTGAAAGATCATGTTATTCAAGTTCCTACGCTCGGAAAAATTGGTACATGCTGTCTTGCTGGGGTTTTGTGGAACGGTACGCTGCATATCGCGAATCTTGGTGATTCGCGTGCTGTGATCGGTTCTATGTTTAACAGAAGAATCCTTCCTGTACAATTGACAAGAGATCACAGTTGTGAAAATCCAGAGATTCGACAGGAACTCGAGGCATTGCATCCCGGTGATGAAACCATTGTGATGCATGCTAGAGGAGCGTGGCGCGTCAAAGGCATCATTAtgGTCAGTAGAAGTATTGGTGATACATATTTGAAGAAGCCCGCTTTTCCGTTGCCAGATTACGAAAAAGTTCCTGATCCTTATGATAGAGCAGTGTTATCTGCAGTACCAGAGATGTTAACTAGAGTTATAGCAGATACTGATAAGTTTCTTATATTTGCTTCTGATGGACTTTGGGAGCATCTGTCAAATGAACGAGCAGTTGAAATTGTTCATAGGTATCCAAGACATGGAATTGCTAAGAGGCTTGTGACTACTGCTCTAGTGGCAGCTGCTACTAGCAGACGTACTACCTATAGGGAAATGCAGGCTGTGGCTCCAGGACTTGGAGACGGCAGGAGGACTTATCACGACGATATAAGTGTTATTGTCGTTTTCTTTGACAAGAAACCACTTATCAAGAAGAGTGTCCCAAGTCTGTCCTACAGAGGCTCAACTGAGGTGAGCCAACAATCAGCATTTGCACAGTTTCCATTAACTGCTACGGTAGCGCAGTCATTAGCAGGAAGCCTGAAGAACAGTTTCAACAAACGGTTTAAGGGAAAAGGCAAACTTGAGGCGCCTGAGACCTTTAAGGGAAAAGGCAAACTTGAGGCGCCTGAGACCTTTAAGGGAAAAGGCAAACTTGAGGCGCCTGAGACCTTTAAGGGAAAAGGCAAACTTGAGGCGCCTGAGACCTTTAAGGGAAAAGGCAAACTTGAGGCGCCTGAGACCTCTGCAGATCGGGTTGATCGTGATGACAATAATCAGGCTGAGAGCTCTAAGGCAAAAAGCCGTTGGAACACTCTGAAAAAGAAGTTTACACCgaagaagaaatag 1458 0.4458 MHKLLQSVLDRVKKNDDLTAFDQDPLTRSISLERHCCGEFSMANVQANSSMEDQSQVEVASKNALYLGVYDGHGGVEASFHVLTELFNHLLRIADENGDNALTDATLRNAVAATENAFLEYVKDHVIQVPTLGKIGTCCLAGVLWNGTLHIANLGDSRAVIGSMFNRRILPVQLTRDHSCENPEIRQELEALHPGDETIVMHARGAWRVKGIIMVSRSIGDTYLKKPAFPLPDYEKVPDPYDRAVLSAVPEMLTRVIADTDKFLIFASDGLWEHLSNERAVEIVHRYPRHGIAKRLVTTALVAAATSRRTTYREMQAVAPGLGDGRRTYHDDISVIVVFFDKKPLIKKSVPSLSYRGSTEVSQQSAFAQFPLTATVAQSLAGSLKNSFNKRFKGKGKLEAPETFKGKGKLEAPETFKGKGKLEAPETFKGKGKLEAPETFKGKGKLEAPETSADRVDRDDNNQAESSKAKSRWNTLKKKFTPKKK 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03282 485 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 12 359 - -
Tsu07g03282 485 CDD PP2Cc 40 340 IPR001932 -
Tsu07g03282 485 SUPERFAMILY PP2C-like 29 341 IPR036457 -
Tsu07g03282 485 MobiDBLite consensus disorder prediction 399 466 - -
Tsu07g03282 485 ProSiteProfiles PPM-type phosphatase domain profile. 39 340 IPR001932 -
Tsu07g03282 485 PANTHER ALPHABET, ISOFORM E-RELATED 12 359 - -
Tsu07g03282 485 Gene3D - 8 347 IPR036457 -
Tsu07g03282 485 Pfam Protein phosphatase 2C 60 310 IPR001932 -
Tsu07g03282 485 MobiDBLite consensus disorder prediction 399 485 - -
Tsu07g03282 485 ProSitePatterns PPM-type phosphatase domain signature. 66 74 IPR000222 GO:0043169
Tsu07g03282 485 SMART PP2C_4 24 338 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03282 Tsu-Chr7 39204805 39206983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03282 26 370 PP2C-type Phosphatase Gene Family AT5G06750 48.451 3.02e-105 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03282 K01102 - psom:113323434 336.265