Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03277 ATGATAAATCAAAAGGCTGAGATTGAATCTCAAGATATGATTGAAGCAGATGAATCTGTTTCTAGTCATCAAGAAAACAGAGGAAAATTTGAATctaagaagaaaatgaagaaagtgAGGTCAATGAAGCTTCAAAGATTGTCAAGTAGAGGAAGAAAACCACAACATGATTACAAATTTTCCATCCTTTCATCTGTTGGTACAGTTGAAGTGGCAGATGCATCACCTAATTACATGAAGGGTACTAGTAGTTCTCATGCAAAGGATAGTTTTCAGATTGAAGAAAGAGTTACCACAAACAAGAGTTTAACAAGAGTGACTACTTTGAAAGTGAAGAGAAGTTTGACTAGAAAGTTATCTGGAAAGACTGAACAAAACAGGAAACTGAAATCATCAAGATCAATCAAGGTTGCATCTGTCAAGGGACCTAAATCAACAATGTTATATTCTGATTCTGAATCAGTTCATGGCAGTGATGAAAAGAATAGGAATAGTACAAGTGATGCTGGTAACAAGTCAAAGAGAGTTATTACTAGAAGATTAAGTTTGAAGCCTGTGAGGATCTCGTCAAAAAAACCAAGTTTGCACAAAGCCACATGTTCTTCCATTATCAAGGATTCACATTTTTCTGATCAGATTGACATTCCACAAGAGGGAAGTAGTTCTCAAGGCATATCAGCTGTTAGGGTTTGTCCATACACTTACTGCTCTCTTCATGGTCATCACCACGGCGATGTGCCTCCGTTGAAGCGCTTTGTGTCGATGAGGAGACGTCAgttgaagacacaaaagtcCGTGAAAAATGACAACAGATCAAAGCAAACTGGTAATGCAAGGAAAGCCACTCAGAAAACCAAAACTGTCCAAAGTAAAGATGGAAACTCTAACTTTCAGAATGCAAAAAATCTGGCAATGGATTCATCGCCTTTTAAATCTTGTGATACTCCACCATCCACTGTTAATGAAGGTGACACTTCAACCAAAGGCAAACATATGGAGCCAGATTTTGAAGTGTTGCAGAATAGTTTTGCACAAGAAGAGCCTAAACCTGGTAGTGCTACTAGTGTGTCATATGGAGTGCAGGAAAGAGAtcagaaatatataaaaaagtggCATTTGATGTATAAGCATGCAGTATTAAGTAACACGGGGAAATGTGAAAATAAGGTTCCCTTTGTTGAGAAGGACATAAAGGCTACAAAGGAAGAAGATGCTCTCGCATTTAATGGAGGAAACAACTCTTGTCACAATTGTAGTGAAACAGATTCTGATATGGATGATGAAAAGAAGAATGTAATTGAGCTGGTGCAGAAAGCATTTGATGAAATCCTTCTCCCTGAAGTTGAAGACCTTTCCTCTGATGATCATTCAAAATCAAGAGGCAATGAAACAGATGAGGTACTCTTAGAAAAGAGTGAAGGTGAGGTTGAAGAAAGGAATGTCACAACTTTTGCAGAATCTCCTAAAGAATTGCAGAAGATGGAGAGCAAACCAAAAAGCTGGAGCCATTTGAAAAAGGTAATCCTCTTGAAAAGGTTTGTAAAGGCATTAGAGAAGGTAAGAAACATCAATCCAAGAAGACCAAGACAGTTGCCTTCAGATGCCAATTTTGAAGCGGAAAAAGTTTTGCTTAACCGACAAACAGcggaagagaagaaaaaatcgGAGGAGTGGATGCTTGACTATGCACTTCAAAAGGTTATTTCTAAACTAGCACCTGCTCAAAGACAAAAGGTGACACTTCTAATAGAAGCTTTTGAAACAATTCGACCTTTTCAAGATGCTGAATATGGACCTCGGTCTACTGCGACAGTGAAATCTCAAGAAAATCCGGTTCAATTACTTGATGCTTCCTCAAATCATAGCAATGAAGAAATAAATGACAGAACAGATTTTGAGGTAACTAAGAGAGCAAggaatgacaaaaatatgattgCATGCAATGAAAATGAGGAAAGTGCTTTTGTCGAATCAACATCAACAGATGTAGTCAAGTTTCCTGTTTTCAATGTGGGGATATTAGAGGAGGAAGTAACAACCATAAGCGAAAATATGGAGCCAGATCATAAAGTTCCGCAGAAGATTTTTGTGCAGGAAGAGCCTAAACATGGTAATAGCACTACTGGTGTGCCATATGGAGTGCAGGAAGGAGATCAGAAGTATATAAAAAAGTGGCATTTGATGTATAAGCGTGCAGTATTAAGTAACACAGGAAAATGCGAAAATGAGCTTCCGTTTGTTGGGAAGGACAATGAGGGTGGAGAGGAAGATGGTGTCACATTCAATGGACCAAAAAAATCTTGTCACAATTATAGTGATACAGATTCAGATATGGATGATGAAAAGAAGAATGTAATTGAGCTTGTGCAAAAAGCATTTGATGAAATTCTTTTCCCTGAAGCTGGAGACCTCTCTTCTGTTGACCATTCTGAATCTAGAAGCTATGGCTCAGAAGATGTACTCTTAGAAAAGAATGAAggtaaagaagaagaaaggaatACCACAACTTTCACAGAATCTCCTAAAGAATCACagaagatggaaaacaaacCGAAAAGCTGGAGCTATCTGAAAAAGGTAATCCTCTTGAAAAGGTTTGTAACGGCATTAGATAAGGTAAGACACATCAATCCAAGAAAACCAAGACAATTGCCTTCAGATGCCAACTTTGAAGCAGAGAAAGTTTTTCTTAATCGCCAAACAGCGGAAGAAAGGAATAAATCGGAGGAGTGGATGCTTGACTACGCACTTCAAAAGGTTATTTCTAAACTTGCACCTGCTCAAAGACAAAGAGTGAGACTTCTAATAGAAGCTTTTGAAACAATTCGGCCATTTCAAGATGCTGAAAAAGGGCTGCGGTCTTCCGTGACGGTGGAATCTCAGGATAATCCAGTTCAATTGCATGATGCTGCTTCAAATCATAGAAAGGAAGAAATAAATGACGAAAGAGATTCTGTTTACTTGGCTAAGTCATTGCTTGGAAAAGTATCATGTTCTAATGATACTATGAAATTTTCAGATAAAGCTAGTGACAATCCAATGCAAGAACTTTGCAATCCTATTAAACCAGTGGAAACTGTAAGCAGTTGTCATGAGGAGGCTCCAACCAATGGAATAGTCGAGGAAGTTCCAGAAGATTTGGTATCAGATTTGAATGCAGAAAATCCAAGTATAAAATCTGGTGATAATAGTGAACaattttctttgacaaaaacCTTAATCCTAAATGGTCTTGTCAGATCACTTAAAGCTAATTTGGTTGTTCCAGAAGCACCGTCAAACCAATTAGACGAACCGACAAGAGGCAGAAAAGATATGATTGAAAAAGATCAACTGGAAACATCGGAAGCTCCTACTAGTGCTGTTGTAGAATCTGAGACTCAGGTAGAGAAACAAGGCAACACAGGATTGTGGTTCATGGTGTTTAAGCACATGGTATCAGATATGACTGAAAACAATTCCAAGACATTAACTGATGTAGCAGATGAGAAAGAGTCAAAGTATGAAGGCGGCATAACAAGAGAAAATTCTGTCTCTGATGAAAGTACACCTGTGATTAATCAAGATATGCACCTCAAGGATCGTGTTCTAGAGGATCGCGAAGTTGAACTTCGACAGACTGAAGCCATTAAGATGGTAGAAGAAGCAATTGATTCAATCCTTCCAGACAGACAGCCACTTACTGACAACAACACAATTGAAGAAAAGATGGAATCTGAAAATGGAATAGCTGTGGAACAAAAAGAAGAATCGGTATCGAAGGAGGGAAACAAACCAAGCCGGAAATTGTCTAGAAATTGGAGCAATCTTAGAAAAGTGGTACTGCTTAAGAGATTCATCAAGGCATTGGAAAAAGTAAGGAAATTCAATCCAAGAGAGCCTAGATATCTACCATTAGAACCTGATTCAGAAGATGAAAAAGTTCAACTGAGGCATCAAGATATGGCAGAGAGAAAAGGCACAGAAGAATGGATGCTTGATTATGCACTTAGACAGGTTGTTTCTAAATTAACTCCAGCTAGGAAGAGAAAGGTGGAGCTGTTGGTCGAAGCTTTCGAGACcgtaaaaaaatga 4074 0.3699 MINQKAEIESQDMIEADESVSSHQENRGKFESKKKMKKVRSMKLQRLSSRGRKPQHDYKFSILSSVGTVEVADASPNYMKGTSSSHAKDSFQIEERVTTNKSLTRVTTLKVKRSLTRKLSGKTEQNRKLKSSRSIKVASVKGPKSTMLYSDSESVHGSDEKNRNSTSDAGNKSKRVITRRLSLKPVRISSKKPSLHKATCSSIIKDSHFSDQIDIPQEGSSSQGISAVRVCPYTYCSLHGHHHGDVPPLKRFVSMRRRQLKTQKSVKNDNRSKQTGNARKATQKTKTVQSKDGNSNFQNAKNLAMDSSPFKSCDTPPSTVNEGDTSTKGKHMEPDFEVLQNSFAQEEPKPGSATSVSYGVQERDQKYIKKWHLMYKHAVLSNTGKCENKVPFVEKDIKATKEEDALAFNGGNNSCHNCSETDSDMDDEKKNVIELVQKAFDEILLPEVEDLSSDDHSKSRGNETDEVLLEKSEGEVEERNVTTFAESPKELQKMESKPKSWSHLKKVILLKRFVKALEKVRNINPRRPRQLPSDANFEAEKVLLNRQTAEEKKKSEEWMLDYALQKVISKLAPAQRQKVTLLIEAFETIRPFQDAEYGPRSTATVKSQENPVQLLDASSNHSNEEINDRTDFEVTKRARNDKNMIACNENEESAFVESTSTDVVKFPVFNVGILEEEVTTISENMEPDHKVPQKIFVQEEPKHGNSTTGVPYGVQEGDQKYIKKWHLMYKRAVLSNTGKCENELPFVGKDNEGGEEDGVTFNGPKKSCHNYSDTDSDMDDEKKNVIELVQKAFDEILFPEAGDLSSVDHSESRSYGSEDVLLEKNEGKEEERNTTTFTESPKESQKMENKPKSWSYLKKVILLKRFVTALDKVRHINPRKPRQLPSDANFEAEKVFLNRQTAEERNKSEEWMLDYALQKVISKLAPAQRQRVRLLIEAFETIRPFQDAEKGLRSSVTVESQDNPVQLHDAASNHRKEEINDERDSVYLAKSLLGKVSCSNDTMKFSDKASDNPMQELCNPIKPVETVSSCHEEAPTNGIVEEVPEDLVSDLNAENPSIKSGDNSEQFSLTKTLILNGLVRSLKANLVVPEAPSNQLDEPTRGRKDMIEKDQLETSEAPTSAVVESETQVEKQGNTGLWFMVFKHMVSDMTENNSKTLTDVADEKESKYEGGITRENSVSDESTPVINQDMHLKDRVLEDREVELRQTEAIKMVEEAIDSILPDRQPLTDNNTIEEKMESENGIAVEQKEESVSKEGNKPSRKLSRNWSNLRKVVLLKRFIKALEKVRKFNPREPRYLPLEPDSEDEKVQLRHQDMAERKGTEEWMLDYALRQVVSKLTPARKRKVELLVEAFETVKK 1357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03277 1357 MobiDBLite consensus disorder prediction 117 131 - -
Tsu07g03277 1357 MobiDBLite consensus disorder prediction 10 32 - -
Tsu07g03277 1357 PANTHER CALMODULIN BINDING PROTEIN PICBP 1031 1356 - -
Tsu07g03277 1357 MobiDBLite consensus disorder prediction 812 850 - -
Tsu07g03277 1357 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 680 1066 IPR044681 GO:0005516
Tsu07g03277 1357 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1031 1356 IPR044681 GO:0005516
Tsu07g03277 1357 SMART CaM_binding_2 825 944 IPR012417 GO:0005516
Tsu07g03277 1357 SMART CaM_binding_2 472 591 IPR012417 GO:0005516
Tsu07g03277 1357 SMART CaM_binding_2 1238 1357 IPR012417 GO:0005516
Tsu07g03277 1357 MobiDBLite consensus disorder prediction 804 850 - -
Tsu07g03277 1357 MobiDBLite consensus disorder prediction 1237 1263 - -
Tsu07g03277 1357 MobiDBLite consensus disorder prediction 1 56 - -
Tsu07g03277 1357 Pfam Plant calmodulin-binding domain 842 942 IPR012417 GO:0005516
Tsu07g03277 1357 Pfam Plant calmodulin-binding domain 1254 1355 IPR012417 GO:0005516
Tsu07g03277 1357 Pfam Plant calmodulin-binding domain 492 589 IPR012417 GO:0005516
Tsu07g03277 1357 MobiDBLite consensus disorder prediction 1237 1261 - -
Tsu07g03277 1357 MobiDBLite consensus disorder prediction 259 331 - -
Tsu07g03277 1357 MobiDBLite consensus disorder prediction 269 325 - -
Tsu07g03277 1357 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 8 653 IPR044681 GO:0005516
Tsu07g03277 1357 MobiDBLite consensus disorder prediction 33 49 - -
Tsu07g03277 1357 MobiDBLite consensus disorder prediction 154 168 - -
Tsu07g03277 1357 MobiDBLite consensus disorder prediction 451 482 - -
Tsu07g03277 1357 MobiDBLite consensus disorder prediction 747 779 - -
Tsu07g03277 1357 MobiDBLite consensus disorder prediction 117 175 - -
Tsu07g03277 1357 PANTHER CALMODULIN BINDING PROTEIN PICBP 680 1066 - -
Tsu07g03277 1357 PANTHER CALMODULIN BINDING PROTEIN PICBP 8 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03277 Tsu-Chr7 39169530 39176062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03277 499 951 Calmodulin-binding Proteins AT5G04020 34.341 3.30e-48 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03277 - - mtr:MTR_7g090500 1899.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03277 07 39169530 39176062 Tsu07g03277 07 39169530 39176062 ECH