Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03268 ATGGGATTGGCTGCAGAGTCACAGTTTCATGTTTTGGCTGTTGATGATAGCATCATAGATAGAAAACTTATTGAAAGGCTTCTCAAAACCTCTTCATATCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTAGAGTTTTTGGGTCTATGTGAGAATGATGAGACCAATCCAAATACACCATCTGTCTTTCCTAACAATCATCAGGAAGTGGAAGTGAATCTTGTTATAACAGATTACTGTATGCCTGGCATGACAGGCTATGATTTGCTTAAGAAAATTAAGGAATCATCATCATTGAGAAACATACCAGTGGTTATTATGTCATCTGAGAATGTGCCTTCAAGGATTAATAGATGTTTGGAGGAAGGAGCAGAAGAATTTTTCTTGAAACCTGTAAGGCTATCAGATTTGAGTAGACTTAAACCTCACATGAAGAAAACCAAATTGAAAGATCAAAAGCAAGAAACAGAACAAATATTTGAAAACTCAGAAATTCTTCAAAATGATCCAAAACAAGCACCAAAAACTCAATTACAACATTCAGAGTCAGAATCACAATCACAGACACAGTTACAAGCACATTCAAATAtagatcaacaacaacaatcactACAACAAGGGAACAATAACAAGAGAAAGAATATGGAACAAGGTCTTTCATCTGAGACTGATAGAACAAGACCAAGATACAGTGGCATAGCTACTGTTctAGCGGTCAACTCAATCTTTGCAATTTGCAATATGGAAAGGAAATCCGTGAAGAAAGTTACTTATGAAGATGTTGAGTGgGTGCAGAATCTCATAGAACGATGCATACAGCTGTATATGACCCCAAAAGAAGTTGTGACCGCACTGCAAAATGAAGCAAAAATAGAACCTGAATTCACCAAATCAGTTTGGCAAAGGCTTGAAGAACAAAATCCTGAGTTCTTCAAAGCTTATTATACAAGATTGGCATTGAAGCAACAAATAGATGAATTCAACAAATTGctagaaaaacaaaagcaattAATGGACTTAGAACAACAAACTAAAGTTGCATCATTACCTACCTCTAATGGATTTCAATATCATGGTGCTTCATCACTACCATATTCTAATGGAACAAATGTCCCTACTAtatcTGAGAATCCGACATGCTATTATGTCTCTGCACAAACTGTAGAAGgtttaaaccaaaacaatatgCAACATGGTGCAGAATCTAGATTATCTAATGCGTATAATAACGGTGCATCATCATTTGGTATGGTTGATATGTCTGCTCATGGAAATATTCCAACCACGCCTTATAGTCATAACTCAAATGGCAGATCATCATTTGGTATGGTTGATATGACTGTTCATGAAGATATTCCAACCATGTCTTATAGGCAAAACTCAAACGGCGAATCATCGCATAGTATGGTTGACATGTCTGCTCATGGAGATATTCCGATTATGCCTTATAGTCAGAACTCAAACTTCGCCTTTGGTTTACAACAAGGAAGTAATGCGGGGATGACCGAGCCTGTATATTCAATTTCTCCACACATGCTCGGTGCTGATGGAAATGTCAGCGAGGCCAACCCAAATGTTGGCATTGCTTCAGCTACACCAATCACTGGTGTCGAGTCTAACTCACATCCGGTTAACGAAGCAGTTCCGAATCCTCCAAATACTTCTTCTAATGGATCACTTTCAAGAATGCTTAGTCTTTCAAATATATCTGATCTTGATTATTTCTTTTCTGATGACTACTCTGAGGCGCCATTCTTAGATTTTAATATTGATGATTTAGATCTTCAAACCATAtctgaaataaaagaaaaaggATTTTACCATGGACTTTGA 1836 0.3551 MGLAAESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLCENDETNPNTPSVFPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLSDLSRLKPHMKKTKLKDQKQETEQIFENSEILQNDPKQAPKTQLQHSESESQSQTQLQAHSNIDQQQQSLQQGNNNKRKNMEQGLSSETDRTRPRYSGIATVLAVNSIFAICNMERKSVKKVTYEDVEWVQNLIERCIQLYMTPKEVVTALQNEAKIEPEFTKSVWQRLEEQNPEFFKAYYTRLALKQQIDEFNKLLEKQKQLMDLEQQTKVASLPTSNGFQYHGASSLPYSNGTNVPTISENPTCYYVSAQTVEGLNQNNMQHGAESRLSNAYNNGASSFGMVDMSAHGNIPTTPYSHNSNGRSSFGMVDMTVHEDIPTMSYRQNSNGESSHSMVDMSAHGDIPIMPYSQNSNFAFGLQQGSNAGMTEPVYSISPHMLGADGNVSEANPNVGIASATPITGVESNSHPVNEAVPNPPNTSSNGSLSRMLSLSNISDLDYFFSDDYSEAPFLDFNIDDLDLQTISEIKEKGFYHGL 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03268 611 SMART REC_2 9 142 IPR001789 GO:0000160
Tsu07g03268 611 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 263 318 IPR006476 -
Tsu07g03268 611 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Tsu07g03268 611 Coils Coil 318 345 - -
Tsu07g03268 611 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Tsu07g03268 611 MobiDBLite consensus disorder prediction 163 228 - -
Tsu07g03268 611 CDD REC_typeA_ARR 11 141 - -
Tsu07g03268 611 Gene3D - 10 242 - -
Tsu07g03268 611 MobiDBLite consensus disorder prediction 541 560 - -
Tsu07g03268 611 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 234 IPR045279 GO:0009736
Tsu07g03268 611 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 4 234 - -
Tsu07g03268 611 SUPERFAMILY CheY-like 8 141 IPR011006 -
Tsu07g03268 611 MobiDBLite consensus disorder prediction 163 217 - -
Tsu07g03268 611 Pfam Plant protein 1589 of unknown function (A_thal_3526) 265 317 IPR006476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03268 Tsu-Chr7 39023501 39040374 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03268 1 238 Response Regulator Gene Family AT3G57040 62.810 6.59e-94 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu07g03268 Response_reg 7.4e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03268 K14492 - gmx:100814494 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03268 07 39023501 39040374 Tsu07g03268 07 39023501 39040374 ECH