Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03249 ATGGCCAACGaaaacaccaacaacaacaataagaccaaagaaaaagagaatgatTATTTTTTGGATGCTAATGAAGATGAAACTGATATTGAAGCTGTTAACTACGACAGTgacaatgataatgatgatgatgatgattatgatcgCAATGAAACAGAACAACCTGAATCTTTCACTTCTCATCAATGGCCTCAAAGTTACAGtgagGCTATTGATCCTTTGACAATTGCTGCTGCACCAAATCTTGGATCAATATTCAAAGCACCAAGTGTTATTTATTCAAGCTTTGTAAATCTTGGATCATCAAGGAGTAACTTAGAATTACAAGATGGAAAGACCCCTTTTTTATCTGGTGCTCAAATTCCAGAAGGGATTCCTAGACAATCAACATGGTGGGAGAAAGCTTCCATTCAAATGCATTTTCCTGAAGAATTGCCTATTGGTTATGGGTGTACCTTCACTCAAACTATATTTAATGGGATTAATGTGATGGCTGGAGTTGGGCTTCTATCTACACCTGATACTATAAAGCAAGCTGGGTGGGCGAGTATGCTGGTGATGGTTATTTTTGCAGTTGTATGTTGTTATACAGCAGAGCTTATGAGACATTGCTTTCAAAACAGAGAAGGCATTGTTAGCTACCCTGATATAGGAGAAGCTGCATTTGGAAAATATGGCCGAGTTATTATATCAatcattttgtacactgaattATATTCATATTGTGTGGAATATATCATCATGGAAGGCGATAATCTTTCTGGTCTGTTTCCTGGAACATCTTTGAATTGGGGAAGTCTCAATTTGGATGACAAGcacttattttcaattttgactGCACTTATTATTCTCCCTACTGTTTGGTTGAAGGATCTTCGTATAATCTCATATCTCTCAGCTGGAGGGGTTATTGCTACAACTTTGATCGGTATGTGTGTGTTTGTTGTCGGGACAAGAAATGATGTTGGATTCCATCAAACTGGTCCATTTGTGAAATGGAGTGGCATTCCATTTGCTTTTGGTATCTACGGCTTTTGCTTTGCAGGACATTCGGTTTTTCCCAATATTTATCAATCTATGGCTAACAAAAAAGAATTTTCCAAGGCAATGATCATATGTTTTATTTTGCCCATGTTGTTATATGGAAGCGTCGGAATCGCAGGATTTCTCATGTTCGGTGAAGGGACTTTGTCTCAGATAACGTTGAATCTACCACGAGATGCATTTGCTACCAAATTCTCCATGTGGACTATTGAATTGTTGCCTAATCACATTGCAAGAACTAATTGGTGTTTCGTTCTTATTAGAACAGCACTGGTTATATCTACAGTTGTTGCTGCTTTTCTGATTCCATTTTTCGggCTAGTGATGGCTTTAATCGGTTCTCTCCTCAGTGTACTTGTGGCAGTGGTATTGCCATCTTTATGTTTTCTGAAAATTGTGGGGAAAAAGGCAACAAGTACACAGGTTACTCTGAGTGTGGTAATTGCTGCATGGGGAATAGTATGTGCTTCACTTGGAACATATTCATCTCTATTAAAGATTGTGCAGGTGCAGATGAGTGACTGA 1569 0.3576 MANENTNNNNKTKEKENDYFLDANEDETDIEAVNYDSDNDNDDDDDYDRNETEQPESFTSHQWPQSYSEAIDPLTIAAAPNLGSIFKAPSVIYSSFVNLGSSRSNLELQDGKTPFLSGAQIPEGIPRQSTWWEKASIQMHFPEELPIGYGCTFTQTIFNGINVMAGVGLLSTPDTIKQAGWASMLVMVIFAVVCCYTAELMRHCFQNREGIVSYPDIGEAAFGKYGRVIISIILYTELYSYCVEYIIMEGDNLSGLFPGTSLNWGSLNLDDKHLFSILTALIILPTVWLKDLRIISYLSAGGVIATTLIGMCVFVVGTRNDVGFHQTGPFVKWSGIPFAFGIYGFCFAGHSVFPNIYQSMANKKEFSKAMIICFILPMLLYGSVGIAGFLMFGEGTLSQITLNLPRDAFATKFSMWTIELLPNHIARTNWCFVLIRTALVISTVVAAFLIPFFGLVMALIGSLLSVLVAVVLPSLCFLKIVGKKATSTQVTLSVVIAAWGIVCASLGTYSSLLKIVQVQMSD 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03249 522 Pfam Transmembrane amino acid transporter protein 426 508 IPR013057 -
Tsu07g03249 522 Pfam Transmembrane amino acid transporter protein 152 408 IPR013057 -
Tsu07g03249 522 MobiDBLite consensus disorder prediction 1 65 - -
Tsu07g03249 522 MobiDBLite consensus disorder prediction 21 51 - -
Tsu07g03249 522 Gene3D Amino acid/polyamine transporter I 150 519 - -
Tsu07g03249 522 PANTHER OS05G0424000 PROTEIN-RELATED 36 517 - -
Tsu07g03249 522 PANTHER AMINO ACID TRANSPORTER AVT1A 36 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03249 Tsu-Chr7 38796793 38802896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03249 7 454 Amino Acid or Auxin Permease AAAP Family AT2G41190 55.230 2.94e-179 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03249 K15015 - gmx:100790344 672.93